PrionDB: 3D information

This section lists the available PDB files for the receptors. PDB identifiers are extracted from the database cross-reference lines of the Swiss-Prot entries, the PDB databank, and the literature. The PDB identifiers are linked to PDB Structure Explorer (RCSB), the PDBREPORT database (outputs of the WHAT CHECK Structure Analysis) and Summary of PDB Structure (PDBsum).

11 available PDB files (11 from the Swiss-Prot entries, 0 unrelated PDB entries)

• N-terminus
  • 1DVP : go to RCSB or PDBsum or PDBreport:
    Header: TRANSFERASE 21-JAN-00
    Title/Compound: CRYSTAL STRUCTURE OF THE VHS AND FYVE TANDEM DOMAINS OF HRS, A PROTEIN INVOLVED IN MEMBRANE TRAFFICKING AND SIGNAL TRANSDUCTION
    Method: X-RAY DIFFRACTION

    related to Prion-like-(q/n-rich)-domain-bearing proteins: Q17796_CAEEL   

• C-terminus
  • 1G04 : go to RCSB or PDBsum or PDBreport:
    Header: UNKNOWN FUNCTION 05-OCT-00
    Title/Compound: SOLUTION STRUCTURE OF SYNTHETIC 26-MER PEPTIDE CONTAINING 145-169 SHEEP PRION PROTEIN SEGMENT AND C-TERMINAL CYSTEINE
    Method: NMR, 21 STRUCTURES

    related to Mammalian prion proteins: list of receptors

• Other
  • 1AG2 : go to RCSB or PDBsum or PDBreport:
    Header: PRION PROTEIN 31-MAR-97
    Title/Compound: PRION PROTEIN DOMAIN PRP(121-231) FROM MOUSE, NMR, MINIMIZED AVERAGE STRUCTURE
    Method: NMR, MINIMIZED AVERAGE STRUCTURE

    related to Mammalian prion proteins: list of receptors

  • 1B10 : go to RCSB or PDBsum or PDBreport:
    Header: PRION PROTEIN 25-NOV-98
    Title/Compound: SOLUTION NMR STRUCTURE OF RECOMBINANT SYRIAN HAMSTER PRION PROTEIN RPRP(90-231) , 25 STRUCTURES
    Method: NMR, 25 STRUCTURES

    related to Mammalian prion proteins: list of receptors

  • 1DWY : go to RCSB or PDBsum or PDBreport:
    Header: PRION PROTEIN 15-DEC-99
    Title/Compound: BOVINE PRION PROTEIN FRAGMENT 121-230
    Method: NMR, REPRESENTATIVE MINIMIZED STRUCTURE

    related to Mammalian prion proteins: list of receptors

  • 1I17 : go to RCSB or PDBsum or PDBreport:
    Header: UNKNOWN FUNCTION 31-JAN-01
    Title/Compound: NMR STRUCTURE OF MOUSE DOPPEL 51-157
    Method: NMR, 20 STRUCTURES

    related to fragment: list of receptors

  • 1I4M : go to RCSB or PDBsum or PDBreport:
    Header: MEMBRANE PROTEIN 22-FEB-01
    Title/Compound: CRYSTAL STRUCTURE OF THE HUMAN PRION PROTEIN REVEALS A MECHANISM FOR OLIGOMERIZATION
    Method: X-RAY DIFFRACTION

    related to Mammalian prion proteins: list of receptors

  • 1LG4 : go to RCSB or PDBsum or PDBreport:
    Header: PRION PROTEIN 15-APR-02
    Title/Compound: NMR STRUCTURE OF THE HUMAN DOPPEL PROTEIN FRAGMENT 24-152
    Method: NMR, 20 STRUCTURES

    related to Prion-like protein doppel precursor (PrPLP): list of receptors

  • 1OEB : go to RCSB or PDBsum or PDBreport:
    Header: SH3 DOMAIN/COMPLEX 24-MAR-03
    Title/Compound: MONA/GADS SH3C DOMAIN
    Method: X-RAY DIFFRACTION; OTHER DIFFRACTION

    related to Prion-like-(q/n-rich)-domain-bearing proteins: Q8I7I2_CAEEL   

  • 1PBI : go to RCSB or PDBsum or PDBreport:
    Header: BOWMAN-BIRK INHIBITOR 20-AUG-98
    Title/Compound: CRYSTAL STRUCTURE OF A BOWMAN-BIRK INHIBITOR FROM PEA SEEDS
    Method: X-RAY DIFFRACTION

    related to Prion-like-(q/n-rich)-domain-bearing proteins: Q17982_CAEEL   

  • 1S4T : go to RCSB or PDBsum or PDBreport:
    Header: UNKNOWN FUNCTION 18-JAN-04
    Title/Compound: SOLUTION STRUCTURE OF SYNTHETIC 21MER PEPTIDE SPANNING REGION 135-155 (IN HUMAN NUMBERING) OF SHEEP PRION PROTEIN
    Method: NMR, 20 STRUCTURES

    related to Mammalian prion proteins: list of receptors

F.Horn (priondbcmbi.ru.nl), 19-Aug-2005