PrionDB: Prion proteins (PRP, PRNP)

Available data

• Database cross-references for sequences in this family.

• Corresponding cDNAs and pairwise alignments.

• Multiple sequence alignment in:
  • HSSP format
    
  • MSF (50 AA wide) or long MSF format
    
  • mview (80 AA wide) or long mview format.

• Profile used to obtain these alignments.

• Phylogenetic tree with : <= 20 or <= 40 or <= 60 or <= 80 sequences.

• Important residues obtained by CMA. Correlated mutations in mview format.

• MSF alignment with point mutations (MuteXt data only)
• List of sequences for which point mutations are available (MuteXt data only)

Sub-families

• Mammalian prion proteins
• Avian-like prion proteins
• Fish prion proteins
• Other prion proteins
• Yeast prion proteins

Super-families

• List of all families