PrionDB: Extraction of mutation data from the literature

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This data was extracted from Medline abstracts and full texts (when available) in an automated manner.

The table below describes different point mutations at a given position and provides links to other documents. The sentence(s) where the point mutations in PRIO_HUMAN at position 212 were found are listed after the table.


Point mutations at position Q212 in PRIO_HUMAN

ProteinPRIO_HUMAN (P04156)    Gene: PRNP    (other point mutations)Swiss-Prot
Cross-reference table
Family page
PositionQ212
General numbering (PrionDB) -
DomainNot determined
Family alignments Mammalian prion proteins
Prion proteins (PRP, PRNP)
Other point mutations at the same position Position 212 in Mammalian prion proteins family
Position 212 in Prion proteins (PRP, PRNP) family
Reference #1Zuegg J, Gready JE
Biochemistry 1999 Oct 19;38(42):13862-76.
Medline
Text sourceHTML and PDF full texts
Point mutationQ212P (True positive)
Reference #2Tagliavini F, Lievens PM, Tranchant C, Warter JM, Mohr M, Giaccone G, Perini F, Rossi G, Salmona M, Piccardo P, Ghetti B, Beavis RC, Bugiani O, Frangione B, Prelli F
J Biol Chem 2001 Feb 23;276(8):6009-15.
Medline
Text sourceHTML full text
Point mutationQ212P (True positive)
Reference #3Piccardo P, Liepnieks JJ, William A, Dlouhy SR, Farlow MR, Young K, Nochlin D, Bird TD, Nixon RR, Ball MJ, DeCarli C, Bugiani O, Tagliavini F, Benson MD, Ghetti B
Am J Pathol 2001 Jun;158(6):2201-7.
Medline
Text sourceHTML full text
Point mutationQ212P (True positive)
Reference #4Mastrangelo P, Serpell L, Dafforn T, Lesk A, Fraser P, Westaway D
FEBS Lett 2002 Dec 4;532(1-2):21-6.
Medline
Text sourceHTML and PDF full texts
Point mutationQ212P (True positive)
Reference #5Mishra RS, Bose S, Gu Y, Li R, Singh N
J Alzheimers Dis 2003 Feb;5(1):15-23.
Medline
Text sourceabstract
Point mutationQ212P (True positive)
Reference #6Gu Y, Hinnerwisch J, Fredricks R, Kalepu S, Mishra RS, Singh N
Neurobiol Dis 2003 Mar;12(2):133-49.
Medline
Text sourceHTML full text
Point mutationQ212P (True positive)

Relevant sentences

Reference #1 (Zuegg J et al.): Q212P
  • The simulations showed some tendency for the highly conserved hydrophobic segment PrP(112-131) to adopt an (image)-helical conformation and for helix C to split at residues 212-213 , a known disease-associated mutation site (Q212P)

  • The amino acid residues in black boxes are mutation sites known to be associated with inherited forms of PrP diseases in humans [CJD , D178N:129V (3) , V180I (3) , T183A (3) , E200K (3) , R208H (3) , V210I (3) , and M232R (3) ; GSS , P102L (3) , P105L (3) , A117V (3) , Y145Stop (3) , H187R (14) , F198S (3) , D202N (13) , Q212P (13) , and Q217R (3) ; FFI , D178N:129M (3) ; schizophrenia , N171S (12) ] , while in light gray boxes residues involved in some polymorphisms influencing these diseases are shown [M129V (3) , E219K (11) ]

  • The simulations showed some tendency for the highly conserved hydrophobic segment PrP(112-131) to adopt an R-helical conformation and for helix C to split at residues 212-213 , a known disease-associated mutation site (Q212P)

Reference #2 (Tagliavini F et al.): Q212P
  • INTRODUCTION (image)TOP (image)ABSTRACT (image)INTRODUCTION (image)EXPERIMENTAL PROCEDURES (image)RESULTS (image)DISCUSSION (image)REFERENCES Gerstmann-Sträussler-Scheinker disease (GSS)1 is an adult-onset neurodegenerative disorder (1 , 2 ) that is inherited as an autosomal dominant trait and segregates with variant genotypes resulting from the combination of a pathogenic mutation (P102L , P105L , A117V , F198S , D202N , Q212P , and Q217R) and a common polymorphism at codon 129 (Met / Val) in the prion protein (PrP) gene (PRNP) (3-9 )

Reference #3 (Piccardo P et al.): Q212P
  • 3 GSS is caused by mutations P102L , P105L , A117V , G131V , F198S , D202N , Q212P , and Q217R in PRNP

Reference #4 (Mastrangelo P et al.): Q212P
  • Since the remaining GSS mutations (G131V , H178R , F198S , D202N , Q212P and Q217R) do not result in the creation of amino acid residues that are also conserved in Dpl , the hypothesis that GSS PRNP alleles result in PrPC molecules more Dpl-like than wt PrPC was rejected

Reference #5 (Mishra RS et al.): Q212P
  • To further clarify these mechanisms , we investigated the biogenesis of mutant PrP V203I and E211Q associated with Creutzfeldt-Jakob disease , and PrP Q212P associated with Gerstmann-Straussler-Scheinker syndrome in neuroblastoma cells

Reference #6 (Gu Y et al.): Q212P
  • Examples include PrP178N associated with familial Creutzfeldt Jakob disease (CJD) and fatal familial insomnia that accumulates in aggresome-like structures in the cytosol of COS cells (Ma and Lindquist 1999 and Ma and Lindquist 2001 ) , a PrP217R form that fails to acquire the GPI anchor and is degraded by proteasomes (Jin et al. , 2000 ) , and mutant PrPs V203I , E211Q , and Q212P associated with familial CJD and GSS that form aggresome-like structures in the cytosol of transfected neuroblastoma cells (Mishra et al. , in press )


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F.Horn (priondbcmbi.ru.nl), 22-Aug-2005