Swiss-Prot entry

ID   RRG_BRARE      STANDARD;      PRT;   499 AA.
AC   Q91392;
DT   15-JUL-1999 (Rel. 38, Created)
DT   15-JUL-1999 (Rel. 38, Last sequence update)
DT   01-MAY-2005 (Rel. 47, Last annotation update)
DE   Retinoic acid receptor gamma (RAR-gamma) (ZRAR gamma).
GN   Name=rarg; Synonyms=nr1b3;
OS   Brachydanio rerio (Zebrafish) (Danio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; 
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; 
OC   Cyprinidae; Danio. 
OX   NCBI_TaxID=7955;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RX   MEDLINE=95001557; PubMed=7918098 [NCBI, ExPASy, EBI, Israel, Japan]; DOI=10.1016/0925-4773(94)90082-5;
RA   Joore J., der Lans G.B., Lanser P.H., Vervaart J.M., Zivkovic D.,
RA   Speksnijder J.E., Kruijer W.;
RT   "Effects of retinoic acid on the expression of retinoic acid receptors
RT   during zebrafish embryogenesis.";
RL   Mech. Dev. 46:137-150(1994).
CC   -!- FUNCTION: This is a receptor for retinoic acid. This metabolite
CC       has profound effects on vertebrate development. Retinoic acid is a
CC       morphogen and is a powerful teratogen. This receptor controls cell
CC       function by directly regulating gene expression.
CC   -!- SUBCELLULAR LOCATION: Nuclear.
CC   -!- DOMAIN: Composed of three domains: a modulating N-terminal domain,
CC       a DNA-binding domain and a C-terminal steroid-binding domain.
CC   -!- SIMILARITY: Belongs to the nuclear hormone receptor family. NR1
CC       subfamily.
CC   -!- SIMILARITY: Contains 1 nuclear receptor DNA-binding domain.
CC   --------------------------------------------------------------------------
CC   This Swiss-Prot entry is copyright. It is produced through a collaboration
CC   between  the Swiss Institute of Bioinformatics  and the  EMBL outstation -
CC   the European Bioinformatics Institute.  There are no  restrictions on  its
CC   use as long as its content is in no way modified and this statement is not
CC   removed.
CC   --------------------------------------------------------------------------
DR   EMBL; S74156; AAB32277.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   PIR; I51257; I51257.
DR   HSSP; P19793; 1DSZ. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
DR   SMR; Q91392; 71-149, 170-405.
DR   TRANSFAC; T04895; -.
DR   Ensembl; ENSDARG00000034117; Danio_rerio
DR   ZFIN; ZDB-GENE-980526-531; rarg.
DR   InterPro; IPR000536; Hrmon_recept_lig.
DR   InterPro; IPR001723; Stdhrmn_receptor.
DR   InterPro; IPR008946; Str_ncl_receptor.
DR   InterPro; IPR001628; Znf_C4steroid.
DR   InterPro; Graphical view of domain structure.
DR   Pfam; PF00104; Hormone_recep; 1.
DR   Pfam; PF00105; zf-C4; 1.
DR   Pfam; Graphical view of domain structure.
DR   PRINTS; PR01292; RETNOICACIDR.
DR   PRINTS; PR00398; STRDHORMONER.
DR   PRINTS; PR00047; STROIDFINGER.
DR   ProDom; PD000035; Znf_C4steroid; 1.
DR   ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR   SMART; SM00430; HOLI; 1.
DR   SMART; SM00399; ZnF_C4; 1.
DR   PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
DR   PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
DR   CMR; Q91392.
DR   HOVERGEN [Family / Alignment / Tree]
DR   BLOCKS; Q91392.
DR   ProtoNet; Q91392.
DR   ProtoMap; Q91392.
DR   PRESAGE; Q91392.
DR   DIP; Q91392.
DR   ModBase; Q91392.
DR   SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW   DNA-binding; Nuclear protein; Receptor; Transcription;
KW   Transcription regulation; Zinc-finger.
FT   DOMAIN        1     76       Modulating.
FT   DNA_BIND     77    142       Nuclear receptor-type.
FT   ZN_FING      77     97       C4-type.
FT   ZN_FING     113    137       C4-type.
FT   DOMAIN      143    188       Hinge.
FT   DOMAIN      189    409       Ligand-binding.
SQ   SEQUENCE   499 AA;  56179 MW;  83540619FB45A537 CRC64;
     MFDCMEALGM GPRQLYDVTN RGACMLRKAS PFYAGLDPFA WTGTASVRSV ETQSTSSEEM
     VPSSPSPPPP PRVYKPCFVC QDKSSGYHYG VSSCEGCKGF FRRSIQKNMV YTCHRDKNCQ
     INKVTRNRCQ YCRLQKCFEV GMSKEAVRND RNKKKKDVKD EVIPPESYEL SGELEELVNK
     VSKAHQETFP SLCQLGKYTT NSSSDHRIQL DLGLWDKFSE LSTKCIIKIV EFAKRLPGFT
     TLTIADQITL LKSACLDILM LRICTRYTPE QDTMTFSDGL TLNRTQMHNA GFGPLTDLVF
     AFAGQLLPLE MDDTETGLLS AICLICGDRM DLEEPERVDR LQEPLLEALK IYARRRRPNK
     PHMFPRMLMK ITDLRGISTK GAERAITLKM EIPGPMPPLI REMLENPEAF EDQSEATEKK
     PEPEPPAPPP PALLTMKKEQ EDEDDSWATE NGSEPSPEEE DDDDEDGEEE RGTDSDGEAW
     GGQEPNADVS RKSHGGRAQ
//