Swiss-Prot entry

ID   RRG2_MOUSE     STANDARD;      PRT;   447 AA.
AC   P20787;
DT   01-FEB-1991 (Rel. 17, Created)
DT   01-FEB-1991 (Rel. 17, Last sequence update)
DT   01-MAY-2005 (Rel. 47, Last annotation update)
DE   Retinoic acid receptor gamma-B (RAR-gamma-B).
GN   Name=Rarg; Synonyms=Nr1b3;
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; 
OC   Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; 
OC   Muridae; Murinae; Mus. 
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RX   MEDLINE=90220619; PubMed=2157970 [NCBI, ExPASy, EBI, Israel, Japan];
RA   Giguere V., Shago M., Zirngibl R., Tate P., Rossant J., Varmuza S.;
RT   "Identification of a novel isoform of the retinoic acid receptor gamma
RT   expressed in the mouse embryo.";
RL   Mol. Cell. Biol. 10:2335-2340(1990).
RN   [2]
RP   NUCLEOTIDE SEQUENCE OF 1-63.
RX   MEDLINE=90207264; PubMed=2157210 [NCBI, ExPASy, EBI, Israel, Japan];
RA   Kastner P., Krust A., Mendelsohn C., Garnier J.M., Zelent A.,
RA   Leroy P., Staub A., Chambon P.;
RT   "Murine isoforms of retinoic acid receptor gamma with specific
RT   patterns of expression.";
RL   Proc. Natl. Acad. Sci. U.S.A. 87:2700-2704(1990).
CC   -!- FUNCTION: This is a receptor for retinoic acid. This metabolite
CC       has profound effects on vertebrate development. Retinoic acid is a
CC       morphogen and is a powerful teratogen. This receptor controls cell
CC       function by directly regulating gene expression.
CC   -!- SUBCELLULAR LOCATION: Nuclear.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=RAR-gamma-B;
CC         IsoId=P20787-1; Sequence=Displayed;
CC       Name=RAR-gamma-A;
CC         IsoId=P18911-1; Sequence=External;
CC   -!- DOMAIN: Composed of three domains: a modulating N-terminal domain,
CC       a DNA-binding domain and a C-terminal steroid-binding domain.
CC   -!- SIMILARITY: Belongs to the nuclear hormone receptor family. NR1
CC       subfamily.
CC   -!- SIMILARITY: Contains 1 nuclear receptor DNA-binding domain.
CC   --------------------------------------------------------------------------
CC   This Swiss-Prot entry is copyright. It is produced through a collaboration
CC   between  the Swiss Institute of Bioinformatics  and the  EMBL outstation -
CC   the European Bioinformatics Institute.  There are no  restrictions on  its
CC   use as long as its content is in no way modified and this statement is not
CC   removed.
CC   --------------------------------------------------------------------------
DR   EMBL; M34475; AAA40036.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   EMBL; M32069; AAA40033.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   PIR; B34714; B34714.
DR   HSSP; P22932; 2LBD. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
DR   SMR; P20787; 78-152, 171-406.
DR   TRANSFAC; T00717; -.
DR   TRANSFAC; T01341; -.
DR   Ensembl; ENSMUSG00000001288; Mus_musculus
DR   MGD; MGI:97858; Rarg.
DR   GeneLynx; Rarg..
DR   SOURCE; Rarg..
DR   GO; GO:0005634; C:nucleus; IDA.
DR   GO; GO:0005667; C:transcription factor complex; IDA.
DR   GO; GO:0003677; F:DNA binding; IDA.
DR   GO; GO:0005515; F:protein binding; IPI.
DR   GO; GO:0045944; P:positive regulation of transcription from P...; IDA.
DR   InterPro; IPR000536; Hrmon_recept_lig.
DR   InterPro; IPR001723; Stdhrmn_receptor.
DR   InterPro; IPR008946; Str_ncl_receptor.
DR   InterPro; IPR001628; Znf_C4steroid.
DR   InterPro; Graphical view of domain structure.
DR   Pfam; PF00104; Hormone_recep; 1.
DR   Pfam; PF00105; zf-C4; 1.
DR   Pfam; Graphical view of domain structure.
DR   PRINTS; PR01292; RETNOICACIDR.
DR   PRINTS; PR00398; STRDHORMONER.
DR   PRINTS; PR00047; STROIDFINGER.
DR   ProDom; PD000035; Znf_C4steroid; 1.
DR   ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR   SMART; SM00430; HOLI; 1.
DR   SMART; SM00399; ZnF_C4; 1.
DR   PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
DR   PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
DR   CMR; P20787.
DR   HOVERGEN [Family / Alignment / Tree]
DR   BLOCKS; P20787.
DR   ProtoNet; P20787.
DR   ProtoMap; P20787.
DR   PRESAGE; P20787.
DR   DIP; P20787.
DR   ModBase; P20787.
DR   SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW   Alternative splicing; DNA-binding; Multigene family; Nuclear protein;
KW   Receptor; Transcription; Transcription regulation; Zinc-finger.
FT   DOMAIN        1     78       Modulating.
FT   DNA_BIND     79    144       Nuclear receptor-type.
FT   ZN_FING      79     99       C4-type.
FT   ZN_FING     115    139       C4-type.
FT   DOMAIN      145    190       Hinge.
FT   DOMAIN      191    410       Ligand-binding.
SQ   SEQUENCE   447 AA;  49792 MW;  9C45518BC38DAA99 CRC64;
     MYDCMESFVP GPRRLYGAAG PGAGLLRRAT GSSCFAGLES FAWAQPASLQ SVETQSTSSE
     EMVPSSPSPP PPPRVYKPCF VCNDKSSGYH YGVSSCEGCK GFFRRSIQKN MVYTCHRDKN
     CIINKVTRNR CQYCRLQKCF EVGMSKEAVR NDRNKKKKEV KEEGSPDSYE LSPQLEELIT
     KVSKAHQETF PSLCQLGKYT TNSSADHRVQ LDLGLWDKFS ELATKCIIKI VEFAKRLPGF
     TGLSIADQIT LLKAACLDIL MLRICTRYTP EQDTMTFSDG LTLNRTQMHN AGFGPLTDLV
     FAFAGQLLPL EMDDTETGLL SAICLICGDR MDLEEPEKVD KLQEPLLEAL RLYARRRDPA
     KPYMFPRMLM KITDLRGIST KGAERAITLK MEIPGPMPPL IREMLENPEM FEDDSSKPGP
     HPKASSEDEA PGGQGKRGQS PQPDQGP
//