Swiss-Prot entry

ID   Q9U3F1_CAEEL PRELIMINARY;      PRT;   549 AA.
AC   Q9U3F1;
DT   01-MAY-2000 (TrEMBLrel. 13, Created)
DT   01-MAY-2000 (TrEMBLrel. 13, Last sequence update)
DT   01-MAR-2004 (TrEMBLrel. 26, Last annotation update)
DE   Hypothetical protein F44A6.2b.
GN   Name=sex-1; Synonyms=F44A6.2b; ORFNames=F44A6.2;
OS   Caenorhabditis elegans.
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; 
OC   Rhabditidae; Peloderinae; Caenorhabditis. 
OX   NCBI_TaxID=6239;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Bristol N2;
RX   MEDLINE=99069613; PubMed=9851916 [NCBI, ExPASy, EBI, Israel, Japan];
RA   none;
RT   "Genome sequence of the nematode C.elegans: A platform for
RT   investigating biology.";
RL   Science 282:2012-2018(1998).
RN   [2]
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Bristol N2;
RA   Sulston J.E.;
RL   Submitted (AUG-1995) to the EMBL/GenBank/DDBJ databases.
CC   -!- INTERACTION:
CC       Q9U3F4:f42g4.3; NbExp=1; IntAct=EBI-322193, EBI-322208;
CC       O45603:h02i12.5; NbExp=1; IntAct=EBI-322193, EBI-313357;
CC       Q21648:r02f2.5; NbExp=1; IntAct=EBI-322193, EBI-314179;
CC       Q9U1X3:y62e10a.14; NbExp=1; IntAct=EBI-322193, EBI-315967;
CC   -!- SUBCELLULAR LOCATION: Nuclear (By similarity).
CC   -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
DR   EMBL; Z50858; CAB61000.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   HSSP; P20393; 1A6Y. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
DR   IntAct; Q9U3F1; -.
DR   Ensembl; F44A6.2; Caenorhabditis elegans. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   WormBase; WBGene00004786; sex-1.
DR   WormPep; F44A6.2b; CE24972. [WormPep / WormBase / WorfDB]
DR   GO; GO:0005634; C:nucleus; IEA.
DR   GO; GO:0003707; F:steroid hormone receptor activity; IEA.
DR   GO; GO:0003700; F:transcription factor activity; IEA.
DR   GO; GO:0006355; P:regulation of transcription, DNA-dependent; IEA.
DR   GO; GO:0006350; P:transcription; IEA.
DR   InterPro; IPR000536; Hrmon_recept_lig.
DR   InterPro; IPR001723; Stdhrmn_receptor.
DR   InterPro; IPR000324; VitD_receptor.
DR   InterPro; IPR001628; Znf_C4steroid.
DR   InterPro; Graphical view of domain structure.
DR   Pfam; PF00104; Hormone_recep; 1.
DR   Pfam; PF00105; zf-C4; 1.
DR   Pfam; Graphical view of domain structure.
DR   PRINTS; PR00398; STRDHORMONER.
DR   PRINTS; PR00047; STROIDFINGER.
DR   PRINTS; PR00350; VITAMINDR.
DR   ProDom; PD000035; Znf_C4steroid; 1.
DR   ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR   SMART; SM00430; HOLI; 1.
DR   SMART; SM00399; ZnF_C4; 1.
DR   PROSITE; PS00031; NUCLEAR_RECEPTOR; 1.
DR   CMR; Q9U3F1.
DR   ProtoMap; Q9U3F1.
DR   PRESAGE; Q9U3F1.
DR   ModBase; Q9U3F1.
DR   SMR; Q9U3F1.
DR   SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW   DNA-binding; Hypothetical protein; Metal-binding; Nuclear protein;
KW   Receptor; Transcription; Transcription regulation; Zinc; Zinc-finger.
SQ   SEQUENCE   549 AA;  62659 MW;  EAA7EEC5A790D047 CRC64;
     MSFETKPNYL LLTNPDTPLS VCTSPYYSPS GKTASIPSSE ASKPEGTNGQ WSHLPTGATY
     VTDEFSSEFQ IQNGSTAAQS GNANNYADPL SHRRYFNNVN GYNHHQFYDT ASQASVSSPA
     TSVTSSLSPP DSLSNGHTTQ RHHIGKAISF CKVCGDKASG YHYGVTSCEG CKGFFRRSIQ
     RKIDYRCLKQ QVCEIKRESR NRCQYCRFKK CLDSGMSKDS VRQMKFRNAM RDDKSPDSVF
     VPEISTLERQ EEVDAVYEAV LRAHTTFSFY TDIKIRSIVA RPFNVRINED SKMNRLNAWQ
     IYAHEIDVDI KEVVNFVKEI PKFNFINGND KAVLLRKNAF PLYLLRIVRG MSNRGLMLRD
     GRLIDFKSLQ LLYGSLADEM LAFANHIITI GCTDGDIALF IVLILCQPLT TEQQFSTNFK
     SQLQLLEMFD FYKKVLFQKM TCRIDGCDTY KQLMKCIHEL NRLNELHKQQ LNILRENLSF
     LNLPPLVVEM FQLSTLPLPV NHNNQESIRA LNHSSQRQIN NRLPFTASHL CQILIRFHSN
     TIHLQIISL
//