Swiss-Prot entry

ID   Q90Y25_ORENI PRELIMINARY;      PRT;   290 AA.
AC   Q90Y25;
DT   01-DEC-2001 (TrEMBLrel. 19, Created)
DT   01-DEC-2001 (TrEMBLrel. 19, Last sequence update)
DT   01-MAR-2004 (TrEMBLrel. 26, Last annotation update)
DE   Thyroid hormone receptor alpha large isoform (Fragment).
GN   Name=TR-alpha1;
OS   Oreochromis niloticus (Nile tilapia) (Tilapia nilotica).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; 
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei; 
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Perciformes; Labroidei; 
OC   Cichlidae; Oreochromis. 
OX   NCBI_TaxID=8128;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RX   MEDLINE=21094002; PubMed=11174854 [NCBI, ExPASy, EBI, Israel, Japan];
RA   Marchand O., Safi R., Escriva H., Van Rompaey E., Prunet P.,
RA   Laudet V.;
RT   "Molecular cloning and characterization of thyroid hormone receptors
RT   in teleost fish.";
RL   J. Mol. Endocrinol. 26:51-65(2001).
CC   -!- SUBCELLULAR LOCATION: Nuclear (By similarity).
CC   -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
DR   EMBL; AF302248; AAL06728.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   HSSP; P10828; 1NQ0. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
DR   GO; GO:0005634; C:nucleus; IEA.
DR   GO; GO:0003707; F:steroid hormone receptor activity; IEA.
DR   GO; GO:0004887; F:thyroid hormone receptor activity; IEA.
DR   GO; GO:0003700; F:transcription factor activity; IEA.
DR   GO; GO:0006355; P:regulation of transcription, DNA-dependent; IEA.
DR   GO; GO:0006350; P:transcription; IEA.
DR   InterPro; IPR000536; Hrmon_recept_lig.
DR   InterPro; IPR001723; Stdhrmn_receptor.
DR   InterPro; IPR001728; ThyrH_receptor.
DR   InterPro; IPR001628; Znf_C4steroid.
DR   InterPro; Graphical view of domain structure.
DR   Pfam; PF00104; Hormone_recep; 1.
DR   Pfam; PF00105; zf-C4; 1.
DR   Pfam; Graphical view of domain structure.
DR   PRINTS; PR00398; STRDHORMONER.
DR   PRINTS; PR00546; THYROIDHORMR.
DR   ProDom; PD000035; Znf_C4steroid; 1.
DR   ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR   SMART; SM00430; HOLI; 1.
DR   SMART; SM00399; ZnF_C4; 1.
DR   HOVERGEN [Family / Alignment / Tree]
DR   ProtoMap; Q90Y25.
DR   PRESAGE; Q90Y25.
DR   ModBase; Q90Y25.
DR   SMR; Q90Y25.
DR   SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW   DNA-binding; Metal-binding; Nuclear protein; Receptor; Transcription;
KW   Transcription regulation; Zinc; Zinc-finger.
FT   NON_TER       1      1
FT   NON_TER     290    290
SQ   SEQUENCE   290 AA;  33212 MW;  0C7640AA79516FB2 CRC64;
     RTIQKNLHPT YSCKYDGCCI IDKITRNQCQ LCRFKKCIAV GMAMDLVLDD SKRVAKRRLI
     EENRERRKKE EMVKSLQSRP EPTGAEWELI RLVTEAHRHT NAQGSQWKQK RKFLPEKIGQ
     SPVAPTSDGD KVDLEAFSEF TKIITPAITV FFDFAKKLPM FSELPCEDQI ILLKGCCMEI
     MSLRAAMRYD PDSETLTLSG EMAVKREQLK NGGLGVVSDA IFDLGKSLAQ FNLDDTEVAL
     LQAVLLMSSD RSGLTCTDKI EKCQETYLLA FEHYINYRKH NIPHFWPKLL
//