Swiss-Prot entry

ID   Q811X0_MOUSE PRELIMINARY;      PRT;   379 AA.
AC   Q811X0;
DT   01-JUN-2003 (TrEMBLrel. 24, Created)
DT   01-JUN-2003 (TrEMBLrel. 24, Last sequence update)
DT   01-MAR-2004 (TrEMBLrel. 26, Last annotation update)
DE   Farnesoid X receptor beta splice variant 4.
GN   Name=Nr1h5;
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; 
OC   Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. 
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=BALB/c; TISSUE=Liver;
RX   MEDLINE=22417478; PubMed=12529392 [NCBI, ExPASy, EBI, Israel, Japan]; DOI=10.1128/MCB.23.3.864-872.2003;
RA   Otte K., Kranz H., Hoefer M., Haubold B., Remmel B., Kremoser C.,
RA   Buergermeister R., Post M., Balogh I., Jackson D., Fedel K.,
RA   Matena K., Voss H., Fichter V., Kober I., Ellwanger S., Koegl M.,
RA   Casari G., Cheruvallath Z., Kaiser C., Oettl R., Deuschle U.;
RT   "Identification of farnesoid X receptor beta as a novel mammalian
RT   nuclear receptor sensing lanosterol.";
RL   Mol. Cell. Biol. 23:864-872(2003).
CC   -!- SUBCELLULAR LOCATION: Nuclear (By similarity).
CC   -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
DR   EMBL; AY094590; AAM22499.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   HSSP; P34021; 1R0O. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
DR   Ensembl; ENSMUSG00000048938; Mus musculus. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   MGD; MGI:3026618; Nr1h5.
DR   GeneLynx; Nr1h5.
DR   GO; GO:0005634; C:nucleus; IEA.
DR   GO; GO:0003707; F:steroid hormone receptor activity; IEA.
DR   GO; GO:0003700; F:transcription factor activity; IEA.
DR   GO; GO:0006355; P:regulation of transcription, DNA-dependent; IEA.
DR   GO; GO:0006350; P:transcription; IEA.
DR   InterPro; IPR000536; Hrmon_recept_lig.
DR   InterPro; IPR001723; Stdhrmn_receptor.
DR   InterPro; IPR000324; VitD_receptor.
DR   InterPro; IPR001628; Znf_C4steroid.
DR   InterPro; Graphical view of domain structure.
DR   Pfam; PF00104; Hormone_recep; 1.
DR   Pfam; PF00105; zf-C4; 1.
DR   Pfam; Graphical view of domain structure.
DR   PRINTS; PR00398; STRDHORMONER.
DR   PRINTS; PR00047; STROIDFINGER.
DR   PRINTS; PR00350; VITAMINDR.
DR   ProDom; PD000035; Znf_C4steroid; 1.
DR   ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR   SMART; SM00399; ZnF_C4; 1.
DR   PROSITE; PS00031; NUCLEAR_RECEPTOR; 1.
DR   CMR; Q811X0.
DR   HOVERGEN [Family / Alignment / Tree]
DR   ProtoMap; Q811X0.
DR   PRESAGE; Q811X0.
DR   ModBase; Q811X0.
DR   SMR; Q811X0.
DR   SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW   Activator; DNA-binding; Metal-binding; Nuclear protein; Receptor;
KW   Transcription; Transcription regulation; Zinc; Zinc-finger.
SQ   SEQUENCE   379 AA;  42353 MW;  F958FCACC1C333C7 CRC64;
     MANTYVATSD GYYLAEPTQY YDILPEQFHY QLCDTDFQEP PYCQYSTAQF PPALQSPSLQ
     SHFNTHGLDP QYSGGSWCGL DARESGQSTY VVVHDDEDEF PGAQRCRATC SLRWKGQDDM
     LCMVCGDKAS GYHYNALTCE GCKGFFRRSI TKNAVYSCKN GGHCEMDMYM RRKCQECRLK
     KCKAVGMLAE CLLTEIQCKS KRLRKNFKHG PALYPAIQVE DEGADTKHVS SSTRSGKGVQ
     DNMTLTQEEH RLLNTIVTAH QKSMIPLGET SKLLQEGSNP ELSFLRLSEV SVLHIQGLMK
     FTKGLPGFEN LTTEDQAALQ KASKTEVMFL HVAQLYGTMR PAKPSAGTLE VHNPSADESV
     HSPENFLKEG YPSAPLTEE
//