Swiss-Prot entry

ID   Q811W9_MOUSE PRELIMINARY;      PRT;   447 AA.
AC   Q811W9;
DT   01-JUN-2003 (TrEMBLrel. 24, Created)
DT   01-JUN-2003 (TrEMBLrel. 24, Last sequence update)
DT   01-MAR-2004 (TrEMBLrel. 26, Last annotation update)
DE   Farnesoid X receptor beta splice variant 5.
GN   Name=Nr1h5;
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; 
OC   Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. 
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=BALB/c; TISSUE=Liver;
RX   MEDLINE=22417478; PubMed=12529392 [NCBI, ExPASy, EBI, Israel, Japan]; DOI=10.1128/MCB.23.3.864-872.2003;
RA   Otte K., Kranz H., Hoefer M., Haubold B., Remmel B., Kremoser C.,
RA   Buergermeister R., Post M., Balogh I., Jackson D., Fedel K.,
RA   Matena K., Voss H., Fichter V., Kober I., Ellwanger S., Koegl M.,
RA   Casari G., Cheruvallath Z., Kaiser C., Oettl R., Deuschle U.;
RT   "Identification of farnesoid X receptor beta as a novel mammalian
RT   nuclear receptor sensing lanosterol.";
RL   Mol. Cell. Biol. 23:864-872(2003).
CC   -!- SUBCELLULAR LOCATION: Nuclear (By similarity).
CC   -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
DR   EMBL; AY094591; AAM22500.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   HSSP; P34021; 1R0O. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
DR   Ensembl; ENSMUSG00000048938; Mus musculus. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   MGD; MGI:3026618; Nr1h5.
DR   GeneLynx; Nr1h5.
DR   GO; GO:0005634; C:nucleus; IEA.
DR   GO; GO:0003707; F:steroid hormone receptor activity; IEA.
DR   GO; GO:0003700; F:transcription factor activity; IEA.
DR   GO; GO:0006355; P:regulation of transcription, DNA-dependent; IEA.
DR   GO; GO:0006350; P:transcription; IEA.
DR   InterPro; IPR000536; Hrmon_recept_lig.
DR   InterPro; IPR001723; Stdhrmn_receptor.
DR   InterPro; IPR000324; VitD_receptor.
DR   InterPro; IPR001628; Znf_C4steroid.
DR   InterPro; Graphical view of domain structure.
DR   Pfam; PF00104; Hormone_recep; 1.
DR   Pfam; PF00105; zf-C4; 1.
DR   Pfam; Graphical view of domain structure.
DR   PRINTS; PR00398; STRDHORMONER.
DR   PRINTS; PR00350; VITAMINDR.
DR   ProDom; PD000035; Znf_C4steroid; 1.
DR   ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR   SMART; SM00430; HOLI; 1.
DR   SMART; SM00399; ZnF_C4; 1.
DR   CMR; Q811W9.
DR   HOVERGEN [Family / Alignment / Tree]
DR   ProtoMap; Q811W9.
DR   PRESAGE; Q811W9.
DR   ModBase; Q811W9.
DR   SMR; Q811W9.
DR   SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW   DNA-binding; Metal-binding; Nuclear protein; Receptor; Repressor;
KW   Transcription; Transcription regulation; Zinc; Zinc-finger.
SQ   SEQUENCE   447 AA;  50702 MW;  041A01B28D629F54 CRC64;
     MANTYVATSD GYYLAEPTQY YDILPEQFHY QLCDTDFQEP PYCQYSTAQF PPALQSPSLQ
     SHFNTHGLDP QYSGGSWCGL DARESGFFRR SITKNAVYSC KNGGHCEMDM YMRRKCQECR
     LKKCKAVGML AECLLTEIQC KSKRLRKNFK HGPALYPAIQ VEDEGADTKH VSSSTRSGKG
     VQDNMTLTQE EHRLLNTIVT AHQKSMIPLG ETSKLLQEGS NPELSFLRLS EVSVLHIQGL
     MKFTKGLPGF ENLTTEDQAA LQKASKTEVM FLHVAQLYGG KDSTSGSTMR PAKPSAGTLE
     VHNPSADESV HSPENFLKEG YPSAPLTDIT KEFIASLSYF YRRMSELHVS DTEYALLTAT
     TVLFSDRPCL KNKQHIENLQ EPVLQLLFKF SKMYHPEDPQ HFAHLIGRLT ELRTLSHSHS
     EILRMWKTKD PRLVMLFSEK WDLHSFS
//