Swiss-Prot entry

ID   Q80VS1_MOUSE PRELIMINARY;      PRT;   434 AA.
AC   Q80VS1;
DT   01-JUN-2003 (TrEMBLrel. 24, Created)
DT   01-JUN-2003 (TrEMBLrel. 24, Last sequence update)
DT   01-MAR-2004 (TrEMBLrel. 26, Last annotation update)
DE   Esrrb protein (Fragment).
GN   Name=Esrrb;
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; 
OC   Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. 
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Eye;
RX   MEDLINE=22388257; PubMed=12477932 [NCBI, ExPASy, EBI, Israel, Japan]; DOI=10.1073/pnas.242603899;
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G.,
RA   Klausner R.D., Collins F.S., Wagner L., Shenmen C.M., Schuler G.D.,
RA   Altschul S.F., Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K.,
RA   Hopkins R.F., Jordan H., Moore T., Max S.I., Wang J., Hsieh F.,
RA   Diatchenko L., Marusina K., Farmer A.A., Rubin G.M., Hong L.,
RA   Stapleton M., Soares M.B., Bonaldo M.F., Casavant T.L., Scheetz T.E.,
RA   Brownstein M.J., Usdin T.B., Toshiyuki S., Carninci P., Prange C.,
RA   Raha S.S., Loquellano N.A., Peters G.J., Abramson R.D., Mullahy S.J.,
RA   Bosak S.A., McEwan P.J., McKernan K.J., Malek J.A., Gunaratne P.H.,
RA   Richards S., Worley K.C., Hale S., Garcia A.M., Gay L.J., Hulyk S.W.,
RA   Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., Gibbs R.A.,
RA   Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A.,
RA   Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C.,
RA   Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S.,
RA   Krzywinski M.I., Skalska U., Smailus D.E., Schnerch A., Schein J.E.,
RA   Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human
RT   and mouse cDNA sequences.";
RL   Proc. Natl. Acad. Sci. U.S.A. 99:16899-16903(2002).
RN   [2]
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Eye;
RA   Strausberg R.;
RL   Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nuclear (By similarity).
CC   -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
DR   EMBL; BC044858; AAH44858.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   HSSP; O95718; 1LO1. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
DR   MGD; MGI:1346832; Esrrb.
DR   GeneLynx; Esrrb.
DR   GO; GO:0005634; C:nucleus; IEA.
DR   GO; GO:0005496; F:steroid binding; IEA.
DR   GO; GO:0003707; F:steroid hormone receptor activity; IEA.
DR   GO; GO:0003700; F:transcription factor activity; IEA.
DR   GO; GO:0006355; P:regulation of transcription, DNA-dependent; IEA.
DR   GO; GO:0006350; P:transcription; IEA.
DR   InterPro; IPR000536; Hrmon_recept_lig.
DR   InterPro; IPR000003; RtnoidX_receptor.
DR   InterPro; IPR001723; Stdhrmn_receptor.
DR   InterPro; IPR001628; Znf_C4steroid.
DR   InterPro; Graphical view of domain structure.
DR   Pfam; PF00104; Hormone_recep; 1.
DR   Pfam; PF00105; zf-C4; 1.
DR   Pfam; Graphical view of domain structure.
DR   PRINTS; PR00545; RETINOIDXR.
DR   PRINTS; PR00398; STRDHORMONER.
DR   PRINTS; PR00047; STROIDFINGER.
DR   ProDom; PD000035; Znf_C4steroid; 1.
DR   ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR   SMART; SM00430; HOLI; 1.
DR   SMART; SM00399; ZnF_C4; 1.
DR   PROSITE; PS00031; NUCLEAR_RECEPTOR; 1.
DR   CMR; Q80VS1.
DR   HOVERGEN [Family / Alignment / Tree]
DR   ProtoMap; Q80VS1.
DR   PRESAGE; Q80VS1.
DR   ModBase; Q80VS1.
DR   SMR; Q80VS1.
DR   SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW   DNA-binding; Metal-binding; Nuclear protein; Receptor; Transcription;
KW   Transcription regulation; Zinc; Zinc-finger.
FT   NON_TER       1      1
SQ   SEQUENCE   434 AA;  48484 MW;  3679E7337E5762DC CRC64;
     RMSSEDRHLG SSCGSFIKTE PSSPSSGIDA LSHHSPSGSS DASGGFGIAL STHANGLDSP
     PMFAGAGLGG NPCRKSYEDC TSGIMEDSAI KCEYMLNAIP KRLCLVCGDI ASGYHYGVAS
     CEACKAFFKR TIQGNIEYNC PATNECEITK RRRKSCQACR FMKCLKVGML KEGVRLDRVR
     GGRQKYKRRL DSENSPYLNL PISPPAKKPL TKIVSNLLGV EQDKLYAMPP NDIPEGDIKA
     LTTLCELADR ELVFLINWAK HIPGFPSLTL GDQMSLLQSA WMEILILGIV YRSLPYDDKL
     AYAEDYIMDE EHSRLVGLLD LYRAILQLVR RYKKLKVEKE EFMILKALAL ANSDSMYIEN
     LEAVQKLQDL LHEALQDYEL SQRHEEPRRA GKLLLTLPLL RQTAAKAVQH FYSVKLQGKV
     PMHKLFLEML EAKV
//