Swiss-Prot entry
ID Q7ZXI7_XENLA PRELIMINARY; PRT; 405 AA.
AC Q7ZXI7;
DT 01-JUN-2003 (TrEMBLrel. 24, Created)
DT 01-JUN-2003 (TrEMBLrel. 24, Last sequence update)
DT 01-MAR-2004 (TrEMBLrel. 26, Last annotation update)
DE Nr2f2-prov protein.
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Amphibia; Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae;
OC Xenopodinae; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Embryo;
RX MEDLINE=22388257; PubMed=12477932 [NCBI, ExPASy, EBI, Israel, Japan]; DOI=10.1073/pnas.242603899;
RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G.,
RA Klausner R.D., Collins F.S., Wagner L., Shenmen C.M., Schuler G.D.,
RA Altschul S.F., Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K.,
RA Hopkins R.F., Jordan H., Moore T., Max S.I., Wang J., Hsieh F.,
RA Diatchenko L., Marusina K., Farmer A.A., Rubin G.M., Hong L.,
RA Stapleton M., Soares M.B., Bonaldo M.F., Casavant T.L., Scheetz T.E.,
RA Brownstein M.J., Usdin T.B., Toshiyuki S., Carninci P., Prange C.,
RA Raha S.S., Loquellano N.A., Peters G.J., Abramson R.D., Mullahy S.J.,
RA Bosak S.A., McEwan P.J., McKernan K.J., Malek J.A., Gunaratne P.H.,
RA Richards S., Worley K.C., Hale S., Garcia A.M., Gay L.J., Hulyk S.W.,
RA Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., Gibbs R.A.,
RA Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A.,
RA Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C.,
RA Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S.,
RA Krzywinski M.I., Skalska U., Smailus D.E., Schnerch A., Schein J.E.,
RA Jones S.J., Marra M.A.;
RT "Generation and initial analysis of more than 15,000 full-length human
RT and mouse cDNA sequences.";
RL Proc. Natl. Acad. Sci. U.S.A. 99:16899-16903(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Embryo;
RX MEDLINE=22341132; PubMed=12454917 [NCBI, ExPASy, EBI, Israel, Japan]; DOI=10.1002/dvdy.10174;
RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W.,
RA Richardson P.;
RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus
RT initiative.";
RL Dev. Dyn. 225:384-391(2002).
RN [3]
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Embryo;
RA Klein S., Strausberg R.;
RL Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Putative receptor that is required in photoreceptor
CC cells precursors during eye development (By similarity).
CC -!- SUBCELLULAR LOCATION: Nuclear (By similarity).
CC -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
DR EMBL; BC044975; AAH44975.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR HSSP; P19793; 1BY4. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
DR GO; GO:0005634; C:nucleus; IEA.
DR GO; GO:0003707; F:steroid hormone receptor activity; IEA.
DR GO; GO:0003700; F:transcription factor activity; IEA.
DR GO; GO:0006355; P:regulation of transcription, DNA-dependent; IEA.
DR GO; GO:0006350; P:transcription; IEA.
DR GO; GO:0007601; P:visual perception; IEA.
DR InterPro; IPR003068; COUP_TF.
DR InterPro; IPR000536; Hrmon_recept_lig.
DR InterPro; IPR001723; Stdhrmn_receptor.
DR InterPro; IPR001628; Znf_C4steroid.
DR InterPro; Graphical view of domain structure.
DR Pfam; PF00104; Hormone_recep; 1.
DR Pfam; PF00105; zf-C4; 1.
DR Pfam; Graphical view of domain structure.
DR PRINTS; PR01282; COUPTNFACTOR.
DR PRINTS; PR00398; STRDHORMONER.
DR PRINTS; PR00047; STROIDFINGER.
DR ProDom; PD000035; Znf_C4steroid; 1.
DR ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR SMART; SM00430; HOLI; 1.
DR SMART; SM00399; ZnF_C4; 1.
DR PROSITE; PS00031; NUCLEAR_RECEPTOR; 1.
DR HOVERGEN [Family / Alignment / Tree]
DR ProtoMap; Q7ZXI7.
DR PRESAGE; Q7ZXI7.
DR ModBase; Q7ZXI7.
DR SMR; Q7ZXI7.
DR SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW DNA-binding; Metal-binding; Nuclear protein; Receptor; Transcription;
KW Transcription regulation; Vision; Zinc; Zinc-finger.
SQ SEQUENCE 405 AA; 45159 MW; B188EDF3B15BAD6D CRC64;
MAMVVGAWRD PQDDMPGSQT TQAPPGPTGA PHTPQTPGQG VPPTTPAQSN PSSQSSQNQG
EKQQQQHIEC VVCGDKSSGK HYGQFTCEGC KSFFKRSVRR NLTYTCRANR NCPIDQHHRN
QCQYCRLKKC LKVGMRREAV QRGRMPPTQP THGQFALTNG DPLNCHSYLS GYISLLLRAE
PYPTSRFGSQ CMQPNNIMGI ENICELAARM LFSAVEWARN IPFFPDLQIT DQVALLRLTW
SELFVLNAAQ CSMPLHVAPL LAAAGLHASP MSADRVVAFM DHIRIFQEQV EKLKALHVDS
AEYSCLKAIV LFTSDACGLS DVAHVESLQE KSQCALEEYV RSQYPNQPTR FGKLLLRLPS
LRTVSSSVIE QLFFVRLVGK TPIETLIRDM LLSGSSFNWP YMSIQ
//