Swiss-Prot entry

ID   Q766D2_ORYLA PRELIMINARY;      PRT;   411 AA.
AC   Q766D2;
DT   05-JUL-2004 (TrEMBLrel. 27, Created)
DT   05-JUL-2004 (TrEMBLrel. 27, Last sequence update)
DT   05-JUL-2004 (TrEMBLrel. 27, Last annotation update)
DE   Thyroid hormone receptor alpha.
GN   Name=thra;
OS   Oryzias latipes (Medaka fish) (Japanese ricefish).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; 
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei; 
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Atherinomorpha; 
OC   Beloniformes; Adrianichthyidae; Oryziinae; Oryzias. 
OX   NCBI_TaxID=8090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RA   Ebe Y., Yokota H., Murakami H., Nakai M., Yakabe Y., Takatsuki M.;
RL   Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nuclear (By similarity).
CC   -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
DR   EMBL; AB114860; BAD11772.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   HSSP; P20393; 1A6Y. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
DR   GO; GO:0005634; C:nucleus; IEA.
DR   GO; GO:0003707; F:steroid hormone receptor activity; IEA.
DR   GO; GO:0004887; F:thyroid hormone receptor activity; IEA.
DR   GO; GO:0003700; F:transcription factor activity; IEA.
DR   GO; GO:0006355; P:regulation of transcription, DNA-dependent; IEA.
DR   GO; GO:0006350; P:transcription; IEA.
DR   InterPro; IPR000536; Hrmon_recept_lig.
DR   InterPro; IPR001723; Stdhrmn_receptor.
DR   InterPro; IPR001728; ThyrH_receptor.
DR   InterPro; IPR001628; Znf_C4steroid.
DR   InterPro; Graphical view of domain structure.
DR   Pfam; PF00104; Hormone_recep; 1.
DR   Pfam; PF00105; zf-C4; 1.
DR   Pfam; Graphical view of domain structure.
DR   PRINTS; PR00398; STRDHORMONER.
DR   PRINTS; PR00047; STROIDFINGER.
DR   PRINTS; PR00546; THYROIDHORMR.
DR   ProDom; PD000035; Znf_C4steroid; 1.
DR   ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR   SMART; SM00430; HOLI; 1.
DR   SMART; SM00399; ZnF_C4; 1.
DR   PROSITE; PS00031; NUCLEAR_RECEPTOR; 1.
DR   HOVERGEN [Family / Alignment / Tree]
DR   ProtoMap; Q766D2.
DR   PRESAGE; Q766D2.
DR   ModBase; Q766D2.
DR   SMR; Q766D2.
DR   SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW   DNA-binding; Metal-binding; Nuclear protein; Receptor; Transcription;
KW   Transcription regulation; Zinc; Zinc-finger.
SQ   SEQUENCE   411 AA;  47147 MW;  E8C1A10821E3E588 CRC64;
     MEHMPKEQDS NSNPSEGEEK QWLNGPKRKR KNSQCSVKSM TGYIPSYLEK DEPCVVCGDK
     ATGYHYRCIT CEGCKGFFRR TIQKSLHPSY SCKYDGCCII DKITRNQCQL CRFKKCIDVG
     MAMDLVLDDS KRVAKRRLIE ENREKRKKEE MVKSLQTRPE PTVDEWDLIR MVTEAHRNTN
     AQGAQWKQKR KFLPEKIGQS PVAPTSDGDK VDLEAFSEFT KIITPAITRV VDFAKKLPMF
     SELPCEDQII LLKGCCMEIM SLRAAIRYDP ESETLTLSGE MAVKREQLKN GGLGVVSDAI
     FDLGKSLAQF NLDDTEVALL QAVLLMSSDR SGLTCVDKIE KCQETYLLAF EHYINYRKHN
     IPHFWPKLLM KVTDLRMIGA CHASRFLHMK VECPNELFPP LFLEVFEDQE V
//