Swiss-Prot entry

ID   Q6TNS3_BRARE PRELIMINARY;      PRT;   637 AA.
AC   Q6TNS3;
DT   05-JUL-2004 (TrEMBLrel. 27, Created)
DT   05-JUL-2004 (TrEMBLrel. 27, Last sequence update)
DT   05-JUL-2004 (TrEMBLrel. 27, Last annotation update)
DE   Nuclear receptor subfamily 1, group D, member 1.
GN   Name=NR1D1;
OS   Brachydanio rerio (Zebrafish) (Danio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; 
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; 
OC   Cyprinidae; Danio. 
OX   NCBI_TaxID=7955;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=15520368 [NCBI, ExPASy, EBI, Israel, Japan]; DOI=10.1073/pnas.0407241101;
RA   Song H.D., Sun X.J., Deng M., Zhang G.W., Zhou Y., Wu X.Y., Sheng Y.,
RA   Chen Y., Ruan Z., Jiang C.L., Fan H.Y., Zon L.I., Kanki J.P.,
RA   Liu T.X., Look A.T., Chen Z.;
RT   "Hematopoietic gene expression profile in zebrafish kidney marrow.";
RL   Proc. Natl. Acad. Sci. U.S.A. 101:16240-16245(2004).
CC   -!- SUBCELLULAR LOCATION: Nuclear (By similarity).
CC   -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
DR   EMBL; AY391444; AAQ91256.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   HSSP; P20393; 1A6Y. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
DR   GO; GO:0005634; C:nucleus; IEA.
DR   GO; GO:0003707; F:steroid hormone receptor activity; IEA.
DR   GO; GO:0004887; F:thyroid hormone receptor activity; IEA.
DR   GO; GO:0003700; F:transcription factor activity; IEA.
DR   GO; GO:0006355; P:regulation of transcription, DNA-dependent; IEA.
DR   GO; GO:0006350; P:transcription; IEA.
DR   InterPro; IPR000536; Hrmon_recept_lig.
DR   InterPro; IPR001723; Stdhrmn_receptor.
DR   InterPro; IPR001728; ThyrH_receptor.
DR   InterPro; IPR001628; Znf_C4steroid.
DR   InterPro; Graphical view of domain structure.
DR   Pfam; PF00104; Hormone_recep; 1.
DR   Pfam; PF00105; zf-C4; 1.
DR   Pfam; Graphical view of domain structure.
DR   PRINTS; PR00398; STRDHORMONER.
DR   PRINTS; PR00047; STROIDFINGER.
DR   PRINTS; PR00546; THYROIDHORMR.
DR   ProDom; PD000035; Znf_C4steroid; 1.
DR   ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR   SMART; SM00430; HOLI; 1.
DR   SMART; SM00399; ZnF_C4; 1.
DR   PROSITE; PS00031; NUCLEAR_RECEPTOR; 1.
DR   CMR; Q6TNS3.
DR   HOVERGEN [Family / Alignment / Tree]
DR   ProtoMap; Q6TNS3.
DR   PRESAGE; Q6TNS3.
DR   ModBase; Q6TNS3.
DR   SMR; Q6TNS3.
DR   SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW   DNA-binding; Metal-binding; Nuclear protein; Receptor; Transcription;
KW   Transcription regulation; Zinc; Zinc-finger.
SQ   SEQUENCE   637 AA;  69456 MW;  BEDC84BC73B46C5F CRC64;
     MTLLGLNMTT AVDTNNTGGV ISYIGSCGGS PNRTSPVSMY SENSNSSMQS LTQPCFGSSF
     PPSPNGSHDS SRMYTSSSSS SSSGSGEDGN SSCSGGSPRG RDDGGSARNS PNKSVATLTK
     LNGMVLLCKV CGDVASGFHY GVHACEGCKG FFRRSIQQNI QYKKCLKNET CTIMRINRNR
     CQQCRFKKCL SVGMSRDAVR FGRIPKREKQ RMLAEMQNAM NNMVNNQLQN EFQLASITSN
     TPCPSSSSPS NTSSSSSSPC PGLTVGPQPQ PPAVPVAQSP SSPAPTSPTV QLAQSPPPLT
     STPPPCTSPG VDKTIAAITR AHRETFIYAH DKLGSPLLPH NSELDNRSNN RCMAGYHLNG
     HNTIYHHDNN VAHHCNNFEV QQDNSLHFQA SQTPEKHQQH NNNSQRPPNS NFYSIHHGTR
     DEQRIPGSEL SMEKHKEILL ACPMNMHPYS DPNKTPQEIW EDFSLSFTPA VREVVEFAKH
     IPGFSTLSQN DQVTLLKAGT FEVLMVRFSS LFNVKEKTVT FISGATYSLE ALKSMGMGDL
     LGTMFDFSEK LNSLELSAEE LGLFTAVVLV SADRSGIENV NSVEMLQESL IRALRTLVSK
     SAPTDASRFT KLLLKLPDLR TLNNMHSEKL LSFRIDA
//