Swiss-Prot entry

ID   Q6F3J6_CONMY PRELIMINARY;      PRT;   416 AA.
AC   Q6F3J6;
DT   25-OCT-2004 (TrEMBLrel. 28, Created)
DT   25-OCT-2004 (TrEMBLrel. 28, Last sequence update)
DT   25-OCT-2004 (TrEMBLrel. 28, Last annotation update)
DE   Thyroid hormone receptor alpha A.
GN   Name=TRalphaA;
OS   Conger myriaster (Conger eel).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; 
OC   Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Congridae; 
OC   Conger. 
OX   NCBI_TaxID=7943;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=12812781 [NCBI, ExPASy, EBI, Israel, Japan]; DOI=10.1016/S0016-6480(03)00087-X;
RA   Kawakami Y., Tanda M., Adachi S., Yamauchi K.;
RT   "Characterization of thyroid hormone receptor alpha and beta in the
RT   metamorphosing Japanese conger eel, Conger myriaster.";
RL   Gen. Comp. Endocrinol. 132:321-332(2003).
RN   [2]
RP   NUCLEOTIDE SEQUENCE.
RA   Kawakami Y.;
RL   Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nuclear (By similarity).
CC   -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
DR   EMBL; AB183396; BAD27473.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   GO; GO:0005634; C:nucleus; IEA.
DR   GO; GO:0003707; F:steroid hormone receptor activity; IEA.
DR   GO; GO:0004887; F:thyroid hormone receptor activity; IEA.
DR   GO; GO:0003700; F:transcription factor activity; IEA.
DR   GO; GO:0006355; P:regulation of transcription, DNA-dependent; IEA.
DR   GO; GO:0006350; P:transcription; IEA.
DR   InterPro; IPR000536; Hrmon_recept_lig.
DR   InterPro; IPR001723; Stdhrmn_receptor.
DR   InterPro; IPR001728; ThyrH_receptor.
DR   InterPro; IPR001628; Znf_C4steroid.
DR   InterPro; Graphical view of domain structure.
DR   Pfam; PF00104; Hormone_recep; 1.
DR   Pfam; PF00105; zf-C4; 1.
DR   Pfam; Graphical view of domain structure.
DR   PRINTS; PR00398; STRDHORMONER.
DR   PRINTS; PR00047; STROIDFINGER.
DR   PRINTS; PR00546; THYROIDHORMR.
DR   ProDom; PD000035; Znf_C4steroid; 1.
DR   ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR   SMART; SM00430; HOLI; 1.
DR   SMART; SM00399; ZnF_C4; 1.
DR   PROSITE; PS00031; NUCLEAR_RECEPTOR; 1.
DR   HOVERGEN [Family / Alignment / Tree]
DR   ProtoMap; Q6F3J6.
DR   PRESAGE; Q6F3J6.
DR   ModBase; Q6F3J6.
DR   SMR; Q6F3J6.
DR   SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW   DNA-binding; Metal-binding; Nuclear protein; Receptor; Transcription;
KW   Transcription regulation; Zinc; Zinc-finger.
SQ   SEQUENCE   416 AA;  47740 MW;  0FC0FADF7353B1C9 CRC64;
     MEHMPKEQDP NLSEGEEKRW LDGPKRKRKN SQCSVKSMSV LSLSVPGYIP SYLEKDEPCV
     VCGDKATGYH YRCITCEGCK GFFRRTIQKN LHPSYSCKYD GCCIIDKITR NQCQLCRFKK
     CIAVGMAMDL VLDDKKRVEK RRLIEENRER RRKEEMVKTL QNRPEPSGSE WELIHLVTEA
     HRHTNAQGSH WKQKRKFLPE DIGQSPVAPT SDGDKVDLEA FSEFTKIITP AITRVVDFAK
     KLPMFSELPC EDQIILLKGC CMEIMSLRAA VRYDPDSETL TLSGEMAVKR EQLKNGGLGV
     VSDAIFDLGK SLAQFNLDDS EVALLQAVLL MSSDRSGLTC VEKIEKCQET YLLAFERYIN
     YRKHNIPHFW PKLLMKVTDL RMIGACHASR FLHMKVECPT ELFPPLFLEV FEDQDV
//