Swiss-Prot entry

ID   Q6F3J5_CONMY PRELIMINARY;      PRT;   409 AA.
AC   Q6F3J5;
DT   25-OCT-2004 (TrEMBLrel. 28, Created)
DT   25-OCT-2004 (TrEMBLrel. 28, Last sequence update)
DT   25-OCT-2004 (TrEMBLrel. 28, Last annotation update)
DE   Thyroid hormone receptor alpha B.
GN   Name=TRalphaB;
OS   Conger myriaster (Conger eel).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; 
OC   Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Congridae; 
OC   Conger. 
OX   NCBI_TaxID=7943;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=12812781 [NCBI, ExPASy, EBI, Israel, Japan]; DOI=10.1016/S0016-6480(03)00087-X;
RA   Kawakami Y., Tanda M., Adachi S., Yamauchi K.;
RT   "Characterization of thyroid hormone receptor alpha and beta in the
RT   metamorphosing Japanese conger eel, Conger myriaster.";
RL   Gen. Comp. Endocrinol. 132:321-332(2003).
RN   [2]
RP   NUCLEOTIDE SEQUENCE.
RA   Kawakami Y.;
RL   Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nuclear (By similarity).
CC   -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
DR   EMBL; AB183397; BAD27474.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   GO; GO:0005634; C:nucleus; IEA.
DR   GO; GO:0003707; F:steroid hormone receptor activity; IEA.
DR   GO; GO:0004887; F:thyroid hormone receptor activity; IEA.
DR   GO; GO:0003700; F:transcription factor activity; IEA.
DR   GO; GO:0006355; P:regulation of transcription, DNA-dependent; IEA.
DR   GO; GO:0006350; P:transcription; IEA.
DR   InterPro; IPR000536; Hrmon_recept_lig.
DR   InterPro; IPR001723; Stdhrmn_receptor.
DR   InterPro; IPR001728; ThyrH_receptor.
DR   InterPro; IPR001628; Znf_C4steroid.
DR   InterPro; Graphical view of domain structure.
DR   Pfam; PF00104; Hormone_recep; 1.
DR   Pfam; PF00105; zf-C4; 1.
DR   Pfam; Graphical view of domain structure.
DR   PRINTS; PR00398; STRDHORMONER.
DR   PRINTS; PR00047; STROIDFINGER.
DR   PRINTS; PR00546; THYROIDHORMR.
DR   ProDom; PD000035; Znf_C4steroid; 1.
DR   ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR   SMART; SM00430; HOLI; 1.
DR   SMART; SM00399; ZnF_C4; 1.
DR   PROSITE; PS00031; NUCLEAR_RECEPTOR; 1.
DR   HOVERGEN [Family / Alignment / Tree]
DR   ProtoMap; Q6F3J5.
DR   PRESAGE; Q6F3J5.
DR   ModBase; Q6F3J5.
DR   SMR; Q6F3J5.
DR   SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW   DNA-binding; Metal-binding; Nuclear protein; Receptor; Transcription;
KW   Transcription regulation; Zinc; Zinc-finger.
SQ   SEQUENCE   409 AA;  47019 MW;  88E8CD4502BB1A91 CRC64;
     MEHMPEEQDP NPSEGEEKRW LDGPKRKRKN SQCSVKSMSG YIPSYLEKDE PCVVCGDKAT
     GYHYRCITCE GCKGFFRRTI QKNLHPSYSC KYDGCCIIDK ITRNQCQLCR FKKCISVGMA
     MDLVLDDSKR VAKRRLIEEN RERRKKEEMV KTLQNRPEPT NSEWELIRMV TEAHRHTNAQ
     GSHWKQKRKF LPEDIGQSPV APTSDGDKVD LEAFSEFTKI ITPAITRVVD FAKKLPMFSE
     LPCEDQIILL KGCCMEIMSL RAAVRYDPES ETLTLSGEMA VKREQLKNGG LGVVSDAIFD
     LGKSLAQFNL DDTEVALLQA VLLTSSDRSG LTCVEKIEKC QETYLLAFEH YINYRKHNIP
     HFWPKLLMKV TDLRMIGACH ASRFLHMKVE CPTELFPPLF LEVFEDQEV
//