Swiss-Prot entry

ID   NR1D1_RAT      STANDARD;      PRT;   508 AA.
AC   Q63503;
DT   15-JUL-1999 (Rel. 38, Created)
DT   15-JUL-1999 (Rel. 38, Last sequence update)
DT   01-MAY-2005 (Rel. 47, Last annotation update)
DE   Orphan nuclear receptor NR1D1 (V-erbA related protein EAR-1) (Rev-
DE   erbA-alpha).
GN   Name=Nr1d1;
OS   Rattus norvegicus (Rat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; 
OC   Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; 
OC   Muridae; Murinae; Rattus. 
OX   NCBI_TaxID=10116;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RX   MEDLINE=89261716; PubMed=2542765 [NCBI, ExPASy, EBI, Israel, Japan];
RA   Lazar M.A., Hodin R.A., Darling D.S., Chin W.W.;
RT   "A novel member of the thyroid/steroid hormone receptor family is
RT   encoded by the opposite strand of the rat c-erbA alpha transcriptional
RT   unit.";
RL   Mol. Cell. Biol. 9:1128-1136(1989).
CC   -!- FUNCTION: Possible receptor for triiodothyronine (By similarity).
CC   -!- SUBCELLULAR LOCATION: Nuclear (By similarity).
CC   -!- DOMAIN: Composed of three domains: a modulating N-terminal domain,
CC       a DNA-binding domain and a C-terminal steroid-binding domain.
CC   -!- SIMILARITY: Belongs to the nuclear hormone receptor family. NR1
CC       subfamily.
CC   -!- SIMILARITY: Contains 1 nuclear receptor DNA-binding domain.
CC   --------------------------------------------------------------------------
CC   This Swiss-Prot entry is copyright. It is produced through a collaboration
CC   between  the Swiss Institute of Bioinformatics  and the  EMBL outstation -
CC   the European Bioinformatics Institute.  There are no  restrictions on  its
CC   use as long as its content is in no way modified and this statement is not
CC   removed.
CC   --------------------------------------------------------------------------
DR   EMBL; M25804; AAA74939.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   HSSP; P20393; 1A6Y. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
DR   SMR; Q63503; 21-104.
DR   TRANSFAC; T01344; -.
DR   Ensembl; ENSRNOG00000009329; Rattus_norvegicus
DR   RGD; 628827; Nr1d1.
DR   InterPro; IPR000536; Hrmon_recept_lig.
DR   InterPro; IPR001723; Stdhrmn_receptor.
DR   InterPro; IPR008946; Str_ncl_receptor.
DR   InterPro; IPR000324; VitD_receptor.
DR   InterPro; IPR001628; Znf_C4steroid.
DR   InterPro; Graphical view of domain structure.
DR   Pfam; PF00104; Hormone_recep; 1.
DR   Pfam; PF00105; zf-C4; 1.
DR   Pfam; Graphical view of domain structure.
DR   PRINTS; PR00398; STRDHORMONER.
DR   PRINTS; PR00047; STROIDFINGER.
DR   PRINTS; PR00350; VITAMINDR.
DR   ProDom; PD000035; Znf_C4steroid; 1.
DR   ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR   SMART; SM00430; HOLI; 1.
DR   SMART; SM00399; ZnF_C4; 1.
DR   PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
DR   PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
DR   CMR; Q63503.
DR   HOVERGEN [Family / Alignment / Tree]
DR   BLOCKS; Q63503.
DR   ProtoNet; Q63503.
DR   ProtoMap; Q63503.
DR   PRESAGE; Q63503.
DR   DIP; Q63503.
DR   ModBase; Q63503.
DR   SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW   DNA-binding; Nuclear protein; Receptor; Transcription;
KW   Transcription regulation; Zinc-finger.
FT   DNA_BIND     23     99       Nuclear receptor-type.
FT   ZN_FING      26     46       C4-type.
FT   ZN_FING      63     87       C4-type.
SQ   SEQUENCE   508 AA;  55802 MW;  2406478663432F5A CRC64;
     MEDSSRVSPS KGTSNITKLN GMVLLCKVCG DVASGFHYGV HACEGCKGFF RRSIQQNIQY
     KRCLKNENCS IVRINRNRCQ QCRFKKCLSV GMSRDAVRFG RIPKREKQRM LAEMQNAMNL
     ANNQLSSLCP LETSPAPHPT SGSVGPSPPP APAPTPLVGF SQFPQQLTPP RSPSPEPTVE
     DVISQVARAH REIFTYAHDK LGTSPGNFNA NHASGSPPAT TPQCWESQGC PSTPNDNNLL
     AAQRHNEALN GLRQGPSSYP PTWPSGPAHH SCHQPNSNGH RLCPTHVYSA PEGKAPANGL
     RQGNTKNVLL ACPMNMYPHG RSGRTVQEIW EDFSMSFTPA VREVVEFAKQ IPGFRDLSQH
     DQVTLLKAGT FEVLMVRFAS LFNVKDQTVM FLSRTTYSLQ ELGAMGMGDL LNAMFDFSEK
     LNSLALTEEE LGLFTAVVLV SAEGSGMENS ASVEQLQETL LGALRALVLK NRPSETSRFT
     KLLLKLPDLR TLNNMHSEKL LSFRVDAQ
//