Swiss-Prot entry

ID   NHR97_CAEEL    STANDARD;      PRT;   439 AA.
AC   Q9BJK5; Q9XXL0;
DT   28-FEB-2003 (Rel. 41, Created)
DT   28-FEB-2003 (Rel. 41, Last sequence update)
DT   01-MAY-2005 (Rel. 47, Last annotation update)
DE   Nuclear hormone receptor family member nhr-97.
GN   Name=nhr-97; ORFNames=H27C11.1;
OS   Caenorhabditis elegans.
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; 
OC   Rhabditidae; Peloderinae; Caenorhabditis. 
OX   NCBI_TaxID=6239;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RA   Bogan A., Maina C.V., Yamamoto K., Cohen F., Sluder A.E.;
RT   "Caenorhabditis elegans nuclear receptor sequences exhibit biophysical
RT   compatibility with the ligand-binding domain fold.";
RL   Submitted (DEC-2000) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Bristol N2;
RX   MEDLINE=99069613; PubMed=9851916 [NCBI, ExPASy, EBI, Israel, Japan];
RG   The C. elegans sequencing consortium;
RT   "Genome sequence of the nematode C. elegans: a platform for
RT   investigating biology.";
RL   Science 282:2012-2018(1998).
CC   -!- FUNCTION: Orphan nuclear receptor.
CC   -!- SUBCELLULAR LOCATION: Nuclear (Potential).
CC   -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
CC   -!- SIMILARITY: Contains 1 nuclear receptor DNA-binding domain.
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DR   EMBL; AF332211; AAK17982.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   EMBL; Z82259; CAD36480.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   EMBL; AL022473; CAD36480.1; JOINED. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   EMBL; AL022473; CAA18549.2; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   EMBL; Z82259; CAA18549.2; JOINED. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   HSSP; P19793; 2NLL. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
DR   WormBase; WBGene00003687; H27C11.1.
DR   WormPep; H27C11.1; CE31027. [WormPep / WormBase / WorfDB]
DR   InterPro; IPR000536; Hrmon_recept_lig.
DR   InterPro; IPR001723; Stdhrmn_receptor.
DR   InterPro; IPR008946; Str_ncl_receptor.
DR   InterPro; IPR001628; Znf_C4steroid.
DR   InterPro; Graphical view of domain structure.
DR   Pfam; PF00104; Hormone_recep; 1.
DR   Pfam; PF00105; zf-C4; 1.
DR   Pfam; Graphical view of domain structure.
DR   PRINTS; PR00398; STRDHORMONER.
DR   PRINTS; PR00047; STROIDFINGER.
DR   ProDom; PD000035; Znf_C4steroid; 1.
DR   ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR   SMART; SM00430; HOLI; 1.
DR   SMART; SM00399; ZnF_C4; 1.
DR   PROSITE; PS00031; NUCLEAR_REC_DBD_1; FALSE_NEG.
DR   PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
DR   CMR; Q9BJK5.
DR   BLOCKS; Q9BJK5.
DR   ProtoNet; Q9BJK5.
DR   ProtoMap; Q9BJK5.
DR   PRESAGE; Q9BJK5.
DR   DIP; Q9BJK5.
DR   ModBase; Q9BJK5.
DR   SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW   DNA-binding; Nuclear protein; Receptor; Transcription;
KW   Transcription regulation; Zinc-finger.
FT   DNA_BIND     32    108       Nuclear receptor-type.
FT   ZN_FING      35     56       C4-type.
FT   ZN_FING      72     96       C4-type.
SQ   SEQUENCE   439 AA;  49018 MW;  8891F0C6AAF55761 CRC64;
     MSGDAQPSSN QRATEARPPP SPPLVNEKAA IGALCVVCGD RACSHLYYGV AACHGCKCFF
     WRTVKSRLNY VCRYGGNCSI STAGRNACRY CRFHRCLFVG MKIEAVKMDR KLTKRKKEKT
     DEDDTDDGGS HESFETTTDA KRAKFDNSLL ISSLQLIDKT SSAGNAKLST LHFVQPSLQN
     LLDEPELLDG FRSEMSYRAT RQADEQLCYD SERRLVTWAI DWCRQTAEIA DVHHTNDKIS
     LLRASCAPLV LLELGCQSSF GPSDTQIPFC NNSFLSAHCI PPSTSFLRWK TIQSLNKWAQ
     RELKPLCLRA KEIVLLKALI ALNPDANGLS SDAESSIRML RERVHTALFQ LLMENSEPIT
     AASRLAQILL LIPQLSLMGV DVIEQVKVRN TFNKRSAFGE GLLFWQLYGD IFDDANDDSY
     LEHSASCSPT DSQYTTDSI
//