Swiss-Prot entry
ID NHR64_CAEEL STANDARD; PRT; 412 AA.
AC O44960;
DT 15-DEC-1998 (Rel. 37, Created)
DT 15-DEC-1998 (Rel. 37, Last sequence update)
DT 01-MAY-2005 (Rel. 47, Last annotation update)
DE Nuclear hormone receptor family member nhr-64.
GN Name=nhr-64; ORFNames=C45E1.1;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC Rhabditidae; Peloderinae; Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX MEDLINE=99069613; PubMed=9851916 [NCBI, ExPASy, EBI, Israel, Japan];
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for
RT investigating biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: Orphan nuclear receptor.
CC -!- SUBCELLULAR LOCATION: Nuclear (Potential).
CC -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
CC -!- SIMILARITY: Contains 1 nuclear receptor DNA-binding domain.
CC --------------------------------------------------------------------------
CC This Swiss-Prot entry is copyright. It is produced through a collaboration
CC between the Swiss Institute of Bioinformatics and the EMBL outstation -
CC the European Bioinformatics Institute. There are no restrictions on its
CC use as long as its content is in no way modified and this statement is not
CC removed.
CC --------------------------------------------------------------------------
DR EMBL; AF043694; AAC24283.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR PIR; T32890; T32890.
DR HSSP; P19793; 2NLL. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
DR Ensembl; C45E1.1; Caenorhabditis_elegans
DR WormBase; WBGene00003654; C45E1.1.
DR WormPep; C45E1.1; CE16926. [WormPep / WormBase / WorfDB]
DR InterPro; IPR000536; Hrmon_recept_lig.
DR InterPro; IPR000003; RtnoidX_receptor.
DR InterPro; IPR001723; Stdhrmn_receptor.
DR InterPro; IPR008946; Str_ncl_receptor.
DR InterPro; IPR001628; Znf_C4steroid.
DR InterPro; Graphical view of domain structure.
DR Pfam; PF00104; Hormone_recep; 1.
DR Pfam; PF00105; zf-C4; 1.
DR Pfam; Graphical view of domain structure.
DR PRINTS; PR00545; RETINOIDXR.
DR PRINTS; PR00398; STRDHORMONER.
DR PRINTS; PR00047; STROIDFINGER.
DR ProDom; PD000035; Znf_C4steroid; 1.
DR ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR SMART; SM00430; HOLI; 1.
DR SMART; SM00399; ZnF_C4; 1.
DR PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
DR PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
DR CMR; O44960.
DR BLOCKS; O44960.
DR ProtoNet; O44960.
DR ProtoMap; O44960.
DR PRESAGE; O44960.
DR DIP; O44960.
DR ModBase; O44960.
DR SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW DNA-binding; Nuclear protein; Receptor; Transcription;
KW Transcription regulation; Zinc-finger.
FT DNA_BIND 67 142 Nuclear receptor-type.
FT ZN_FING 70 90 C4-type.
FT ZN_FING 106 130 C4-type.
SQ SEQUENCE 412 AA; 47091 MW; 21486D4C3B30EB91 CRC64;
MIFFQNFDHT KLKIPKNQFL SKFQLFPTHF PFFDSKTVLF SEEMTLEEKE EVSTSTSQSP
QSSSFENVFC AICGDRATGK HYGAMSCDGC KGFFRRTIRK RHSYVCRFGE KCQVDKAKRN
SCRKCRFDVC LRKGMRRDAV QTERDRIRPA NPLSNGSNGG IVPDDPLLDT LIRAEASTRG
LRTTVITKTA EARKQATTND VTDSMNQQLT LMVEWAKVLE GFQRVDNITQ VALLRHFSAQ
HLVMCAAFRS IHLSDAVWLT NETCLHKDSP KIPDMNRVAE RIIDQVTNPM RSLHMNEIEY
IALKAIAFFD PLAKGITSES YSDVEEMRQR ILESFERHVR YVSPYKDMPL RFANLLLLLP
PMLAISRDLV EDVQLAKLFG LASIDNLMLE LMLPNEGKNT TDKTSPPIMC HQ
//