Swiss-Prot entry

ID   COT1_BOVIN     STANDARD;      PRT;   424 AA.
AC   Q9TTR8;
DT   16-OCT-2001 (Rel. 40, Created)
DT   16-OCT-2001 (Rel. 40, Last sequence update)
DT   01-MAY-2005 (Rel. 47, Last annotation update)
DE   COUP transcription factor 1 (COUP-TF1) (COUP-TF I).
GN   Name=NR2F1; Synonyms=TFCOUP1;
OS   Bos taurus (Bovine).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; 
OC   Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; 
OC   Pecora; Bovidae; Bovinae; Bos. 
OX   NCBI_TaxID=9913;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Testis;
RA   Walther N.;
RL   Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Coup (chicken ovalbumin upstream promoter) transcription
CC       factor binds to the ovalbumin promoter and, in conjunction with
CC       another protein (S300-II) stimulates initiation of transcription.
CC       Binds to both direct repeats and palindromes of the 5'-AGGTCA-3'
CC       motif (By similarity).
CC   -!- SUBUNIT: Interacts with COPS2 (By similarity).
CC   -!- SUBCELLULAR LOCATION: Nuclear (Potential).
CC   -!- SIMILARITY: Belongs to the nuclear hormone receptor family. NR2
CC       subfamily.
CC   -!- SIMILARITY: Contains 1 nuclear receptor DNA-binding domain.
CC   --------------------------------------------------------------------------
CC   This Swiss-Prot entry is copyright. It is produced through a collaboration
CC   between  the Swiss Institute of Bioinformatics  and the  EMBL outstation -
CC   the European Bioinformatics Institute.  There are no  restrictions on  its
CC   use as long as its content is in no way modified and this statement is not
CC   removed.
CC   --------------------------------------------------------------------------
DR   EMBL; AJ249440; CAB55623.1; -. [EMBL / GenBank / DDBJ] [CoDingSequence]
DR   HSSP; P19793; 1BY4. [HSSP ENTRY / SWISS-3DIMAGE / PDB]
DR   InterPro; IPR000536; Hrmon_recept_lig.
DR   InterPro; IPR001723; Stdhrmn_receptor.
DR   InterPro; IPR008946; Str_ncl_receptor.
DR   InterPro; IPR001628; Znf_C4steroid.
DR   InterPro; Graphical view of domain structure.
DR   Pfam; PF00104; Hormone_recep; 1.
DR   Pfam; PF00105; zf-C4; 1.
DR   Pfam; Graphical view of domain structure.
DR   PRINTS; PR01282; COUPTNFACTOR.
DR   PRINTS; PR00398; STRDHORMONER.
DR   PRINTS; PR00047; STROIDFINGER.
DR   ProDom; PD000035; Znf_C4steroid; 1.
DR   ProDom [Domain structure / List of seq. sharing at least 1 domain ]
DR   SMART; SM00430; HOLI; 1.
DR   SMART; SM00399; ZnF_C4; 1.
DR   PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
DR   PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
DR   HOVERGEN [Family / Alignment / Tree]
DR   BLOCKS; Q9TTR8.
DR   ProtoNet; Q9TTR8.
DR   ProtoMap; Q9TTR8.
DR   PRESAGE; Q9TTR8.
DR   DIP; Q9TTR8.
DR   ModBase; Q9TTR8.
DR   SWISS-2DPAGE; GET REGION ON 2D PAGE.
KW   Activator; DNA-binding; Nuclear protein; Receptor; Transcription;
KW   Transcription regulation; Zinc-finger.
FT   DOMAIN       32     38       Poly-Gly.
FT   DOMAIN       40     44       Poly-Gln.
FT   DNA_BIND     84    159       Nuclear receptor-type.
FT   ZN_FING      87    107       C4-type.
FT   ZN_FING     123    147       C4-type.
SQ   SEQUENCE   424 AA;  46284 MW;  21B1829462CD5982 CRC64;
     MAMVVSSWRD PQDDVAGGNP GGPNPAAQAA RGGGGGAGEQ QQQQAGSGAP HTPQTPGQPG
     APATPGTAGD KGQGPPGSGQ SQQHIECVVC GDKSSGKHYG QFTCEGCKSF FKRSVRRNLT
     YTCRANRNCP IDQHHRNQCQ YCRLKKCLKV GMRREAVQRG RMPPTQPNPG QYALTNGDPL
     NGHCYLSGYI SLLLRAEPYP TSRYGSQCMQ PNNIMGIENI CELAARLLFS AVEWARNIPF
     FPDLQITDQV SLLRLTWSEL FVLNAAQCSM PLHVAPLLAA AGLHASPMSA DRVVAFMDHI
     RIFQEQVEKL KALHVDSAEY SCLKAIVLFT SDACGLSDAA HIESLQEKSQ CALEEYVRSQ
     YPNQPSRFGK LLLRLPSLRT VSSSVIEQLF FVRLVGKTPI ETLIRDMLLS GSSFNWPYMS
     IQCS
//