NucleaRDB: Cross References for THA1_BRARE

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This section aims to provide a maximum of database cross-references for each protein. This includes the databases cited in the DR lines of the Swiss-Prot entries but also other data sources and internal pointers. Here you get more details about the different databases that we point to.



Protein Description

Swiss-Prot
Identifier
THA1_BRARE (Q98867)
Description
Thyroid hormone receptor alpha 1
Gene thra;nr1a1;tra1
Organism Brachydanio rerio (Zebrafish) (Danio rerio)
Chromosomal location LG 3;LG 13
Gene Ontology QuickGO

Database Cross-References

Local Resources

NucleaRDB entry : THA1_BRARE
NucleaRDB-Family; 1A1 Thyroid hormone alpha
NucleaRDB-cDNA; cDNA_1 (pairwise alignment)

Remote Resources

SWISS-PROT; Q98867
EMBL; U54796
EMBL; AL590145
Ensembl; U54796
GenBank; AL590145
DDBJ; U54796
DDBJ; AL590145
CoDingSequence; AAA99811.1
CoDingSequence; CAD43414.1
SWISS-2DPAGE; Q98867
HSSP; HSSP ENTRY: 1nq0
HSSP; SWISS-3DIMAGE: P10828
HSSP; PDB: 1nq0
; Q98867
TRANSFAC; T04773
ZFIN; ZDB-GENE-990415-263; thra.
InterPro; IPR000536; Hrmon_recept_lig.
InterPro; IPR001723; Stdhrmn_receptor.
InterPro; IPR008946; Str_ncl_receptor.
InterPro; IPR001728; ThyrH_receptor.
InterPro; IPR001628; Znf_C4steroid.
InterPro; Graphical view of domain structure.
Pfam; PF00104; Hormone_recep; 1.
Pfam; PF00105; zf-C4; 1.
Pfam; Graphical view of domain structure.
PRINTS; PR00398; STRDHORMONER.
PRINTS; PR00047; STROIDFINGER.
PRINTS; PR00546; THYROIDHORMR.
ProDom; PD000035; Znf_C4steroid; 1.
PRODOM; Q98867; [Domain structure / List of seq.sharing at least 1 domain]
PRODOM:List of seq.sharing at least 1 domain; Q98867
SMART; SM00430; HOLI; 1.
SMART; SM00399; ZnF_C4; 1.
PROSITE; PS00031
PROSITE; PS51030
CMR; Q98867.
HOVERGEN; Q98867; [Family / Alignment / Tree]
BLOCKS; Q98867.
ProtoNet; Q98867.
ProtoMap; Q98867.
PRESAGE; Q98867.
ModBase; Q98867.
DIP; Q98867.

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M.Mokrane, F.Horn (nucleardbcmbi.kun.nl), 20-Apr-2005