NucleaRDB: Cross References for Q90YL6_BRARE

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This section aims to provide a maximum of database cross-references for each protein. This includes the databases cited in the DR lines of the Swiss-Prot entries but also other data sources and internal pointers. Here you get more details about the different databases that we point to.


Protein Description

 Swiss-Prot
Identifier		 Q90YL6_BRARE (Q90YL6)
Description
Nuclear receptor FF1aE
Gene nr5a2
Organism Brachydanio rerio (Zebrafish) (Danio rerio)
Chromosomal location -
Gene Ontology QuickGO

Database Cross-References

Local Resources

 NucleaRDB entry : Q90YL6_BRARE
NucleaRDB-Family; 5A2 Fetoprotein TF (LRH-1,FTF)
NucleaRDB-cDNA; cDNA_1 (pairwise alignment)

Remote Resources

 SWISS-PROT; Q90YL6
EMBL; AY034061
Ensembl; ENSDARG00000032341; Danio rerio
GenBank; AY034061
DDBJ; AY034061
CoDingSequence; AAK54449.1
SWISS-2DPAGE; Q90YL6
HSSP; HSSP ENTRY: 1pk5
HSSP; SWISS-3DIMAGE: P45448
HSSP; PDB: 1pk5
ZFIN; ZDB-GENE-990415-79; nr5a2.
GO:0005634; C:nucleus; IEA.
GO:0003707; F:steroid hormone receptor activity; IEA.
GO:0003700; F:transcription factor activity; IEA.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA.
GO:0006350; P:transcription; IEA.
InterPro; IPR000536; Hrmon_recept_lig.
InterPro; IPR001723; Stdhrmn_receptor.
InterPro; IPR000324; VitD_receptor.
InterPro; IPR001628; Znf_C4steroid.
InterPro; Graphical view of domain structure.
Pfam; PF00104; Hormone_recep; 1.
Pfam; PF00105; zf-C4; 1.
Pfam; Graphical view of domain structure.
PRINTS; PR00398; STRDHORMONER.
PRINTS; PR00047; STROIDFINGER.
PRINTS; PR00350; VITAMINDR.
ProDom; PD000035; Znf_C4steroid; 1.
PRODOM; Q90YL6; [Domain structure / List of seq.sharing at least 1 domain]
PRODOM:List of seq.sharing at least 1 domain; Q90YL6
SMART; SM00430; HOLI; 1.
SMART; SM00399; ZnF_C4; 1.
PROSITE; PS00031
CMR; Q90YL6.
HOVERGEN; Q90YL6; [Family / Alignment / Tree]
ProtoMap; Q90YL6.
PRESAGE; Q90YL6.
ModBase; Q90YL6.
SMR; Q90YL6.
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M.Mokrane, F.Horn (nucleardbcmbi.kun.nl), 20-Apr-2005