NucleaRDB: Cross References for Q90Y21_SALSA

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This section aims to provide a maximum of database cross-references for each protein. This includes the databases cited in the DR lines of the Swiss-Prot entries but also other data sources and internal pointers. Here you get more details about the different databases that we point to.


Protein Description

 Swiss-Prot
Identifier		 Q90Y21_SALSA (Q90Y21)
Description
Thyroid hormone receptor beta small isoform
Gene TR-beta2
Organism Salmo salar (Atlantic salmon)
Chromosomal location -
Gene Ontology QuickGO

Database Cross-References

Local Resources

 NucleaRDB entry : Q90Y21_SALSA
NucleaRDB-Family; 1A2 Thyroid hormone beta
NucleaRDB-cDNA; cDNA_1 (pairwise alignment)

Remote Resources

 SWISS-PROT; Q90Y21
EMBL; AF302252
GenBank; AF302252
DDBJ; AF302252
CoDingSequence; AAL06732.1
SWISS-2DPAGE; Q90Y21
HSSP; HSSP ENTRY: 2nll
HSSP; SWISS-3DIMAGE: P10828
HSSP; PDB: 2nll
GO:0005634; C:nucleus; IEA.
GO:0003707; F:steroid hormone receptor activity; IEA.
GO:0004887; F:thyroid hormone receptor activity; IEA.
GO:0003700; F:transcription factor activity; IEA.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA.
GO:0006350; P:transcription; IEA.
InterPro; IPR000536; Hrmon_recept_lig.
InterPro; IPR001723; Stdhrmn_receptor.
InterPro; IPR001728; ThyrH_receptor.
InterPro; IPR001628; Znf_C4steroid.
InterPro; Graphical view of domain structure.
Pfam; PF00104; Hormone_recep; 1.
Pfam; PF00105; zf-C4; 1.
Pfam; Graphical view of domain structure.
PRINTS; PR00398; STRDHORMONER.
PRINTS; PR00047; STROIDFINGER.
PRINTS; PR00546; THYROIDHORMR.
ProDom; PD000035; Znf_C4steroid; 1.
PRODOM; Q90Y21; [Domain structure / List of seq.sharing at least 1 domain]
PRODOM:List of seq.sharing at least 1 domain; Q90Y21
SMART; SM00430; HOLI; 1.
SMART; SM00399; ZnF_C4; 1.
PROSITE; PS00031
HOVERGEN; Q90Y21; [Family / Alignment / Tree]
ProtoMap; Q90Y21.
PRESAGE; Q90Y21.
ModBase; Q90Y21.
SMR; Q90Y21.
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M.Mokrane, F.Horn (nucleardbcmbi.kun.nl), 20-Apr-2005