NucleaRDB: Cross References for Q811X1_MOUSE

logo    2005, NucleaRDB.

This section aims to provide a maximum of database cross-references for each protein. This includes the databases cited in the DR lines of the Swiss-Prot entries but also other data sources and internal pointers. Here you get more details about the different databases that we point to.


Protein Description

 Swiss-Prot
Identifier		 Q811X1_MOUSE (Q811X1)
Description
Farnesoid X receptor beta splice variant 3
Gene Nr1h5
Organism Mus musculus (Mouse)
Chromosomal location 3 F2.2
Gene Ontology QuickGO

Database Cross-References

Local Resources

 NucleaRDB entry : Q811X1_MOUSE
NucleaRDB-Family; 1H4 Farnesoid FXR
NucleaRDB-cDNA; cDNA_1 (pairwise alignment)

Remote Resources

 SWISS-PROT; Q811X1
EMBL; AY094589
Ensembl; ENSMUSG00000048938; Mus musculus
GenBank; AY094589
DDBJ; AY094589
CoDingSequence; AAM22498.1
SWISS-2DPAGE; Q811X1
HSSP; HSSP ENTRY: 1r0o
HSSP; SWISS-3DIMAGE: P34021
HSSP; PDB: 1r0o
GeneLynx; Nr1h5.
GO:0005634; C:nucleus; IEA.
GO:0003707; F:steroid hormone receptor activity; IEA.
GO:0003700; F:transcription factor activity; IEA.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA.
GO:0006350; P:transcription; IEA.
InterPro; IPR000536; Hrmon_recept_lig.
InterPro; IPR001723; Stdhrmn_receptor.
InterPro; IPR000324; VitD_receptor.
InterPro; IPR001628; Znf_C4steroid.
InterPro; Graphical view of domain structure.
Pfam; PF00104; Hormone_recep; 1.
Pfam; PF00105; zf-C4; 1.
Pfam; Graphical view of domain structure.
PRINTS; PR00398; STRDHORMONER.
PRINTS; PR00047; STROIDFINGER.
PRINTS; PR00350; VITAMINDR.
ProDom; PD000035; Znf_C4steroid; 1.
PRODOM; Q811X1; [Domain structure / List of seq.sharing at least 1 domain]
PRODOM:List of seq.sharing at least 1 domain; Q811X1
SMART; SM00399; ZnF_C4; 1.
PROSITE; PS00031
CMR; Q811X1.
HOVERGEN; Q811X1; [Family / Alignment / Tree]
ProtoMap; Q811X1.
PRESAGE; Q811X1.
ModBase; Q811X1.
SMR; Q811X1.
MGD; MGI:3026618 - Nr1h5.
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M.Mokrane, F.Horn (nucleardbcmbi.kun.nl), 20-Apr-2005