NucleaRDB: Cross References for Q80ST6_MOUSE

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This section aims to provide a maximum of database cross-references for each protein. This includes the databases cited in the DR lines of the Swiss-Prot entries but also other data sources and internal pointers. Here you get more details about the different databases that we point to.


Protein Description

 Swiss-Prot
Identifier		 Q80ST6_MOUSE (Q80ST6)
Description
Farnesoid X receptor beta splice variant 1
Gene Nr1h5
Organism Mus musculus (Mouse)
Chromosomal location 3 F2.2
Gene Ontology QuickGO

Database Cross-References

Local Resources

 NucleaRDB entry : Q80ST6_MOUSE
NucleaRDB-Family; 1H4 Farnesoid FXR
NucleaRDB-cDNA; cDNA_1 (pairwise alignment)
NucleaRDB-cDNA; cDNA_2 (pairwise alignment)

Remote Resources

 SWISS-PROT; Q80ST6
EMBL; AY094586
EMBL; AY094587
Ensembl; ENSMUSG00000048938; Mus musculus
GenBank; AY094586
GenBank; AY094587
DDBJ; AY094586
DDBJ; AY094587
CoDingSequence; AAM22495.1
CoDingSequence; AAM22496.1
SWISS-2DPAGE; Q80ST6
HSSP; HSSP ENTRY: 1r0o
HSSP; SWISS-3DIMAGE: P34021
HSSP; PDB: 1r0o
GeneLynx; Nr1h5.
GO:0005634; C:nucleus; IEA.
GO:0003707; F:steroid hormone receptor activity; IEA.
GO:0003700; F:transcription factor activity; IEA.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA.
GO:0006350; P:transcription; IEA.
InterPro; IPR000536; Hrmon_recept_lig.
InterPro; IPR001723; Stdhrmn_receptor.
InterPro; IPR000324; VitD_receptor.
InterPro; IPR001628; Znf_C4steroid.
InterPro; Graphical view of domain structure.
Pfam; PF00104; Hormone_recep; 1.
Pfam; PF00105; zf-C4; 1.
Pfam; Graphical view of domain structure.
PRINTS; PR00398; STRDHORMONER.
PRINTS; PR00047; STROIDFINGER.
PRINTS; PR00350; VITAMINDR.
ProDom; PD000035; Znf_C4steroid; 1.
PRODOM; Q80ST6; [Domain structure / List of seq.sharing at least 1 domain]
PRODOM:List of seq.sharing at least 1 domain; Q80ST6
SMART; SM00430; HOLI; 1.
SMART; SM00399; ZnF_C4; 1.
PROSITE; PS00031
CMR; Q80ST6.
HOVERGEN; Q80ST6; [Family / Alignment / Tree]
ProtoMap; Q80ST6.
PRESAGE; Q80ST6.
ModBase; Q80ST6.
SMR; Q80ST6.
MGD; MGI:3026618 - Nr1h5.
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M.Mokrane, F.Horn (nucleardbcmbi.kun.nl), 20-Apr-2005