NucleaRDB: Cross References for PPAT_RAT

logo    2005, NucleaRDB.

This section aims to provide a maximum of database cross-references for each protein. This includes the databases cited in the DR lines of the Swiss-Prot entries but also other data sources and internal pointers. Here you get more details about the different databases that we point to.


Protein Description

 Swiss-Prot
Identifier		 PPAT_RAT (O88275)
Description
Peroxisome proliferator activated receptor gamma (PPAR-gamma)
Gene Pparg;Nr1c3
Organism Rattus norvegicus (Rat)
Chromosomal location 4q42
Gene Ontology QuickGO

Database Cross-References

Local Resources

 NucleaRDB entry : PPAT_RAT
NucleaRDB-Family; 1C3 PPAR gamma
NucleaRDB-cDNA; cDNA_1 (pairwise alignment)
NucleaRDB-cDNA; cDNA_2 (pairwise alignment)
NucleaRDB-cDNA; cDNA_3 (pairwise alignment)
NucleaRDB-cDNA; cDNA_4 (pairwise alignment)
NucleaRDB-cDNA; cDNA_5 (pairwise alignment)
NucleaRDB-cDNA; cDNA_6 (pairwise alignment)
NucleaRDB-cDNA; cDNA_7 (pairwise alignment)

Remote Resources

 SWISS-PROT; O88275
EMBL; AF156666
EMBL; AF156665
EMBL; AB019561
EMBL; Y12882
EMBL; AB011365
EMBL; AF246457
EMBL; AF246458
Ensembl; AF156666
GenBank; AF156665
GenBank; AB019561
GenBank; Y12882
GenBank; AB011365
GenBank; AF246457
GenBank; AF246458
DDBJ; AF156666
DDBJ; AF156665
DDBJ; AB019561
DDBJ; Y12882
DDBJ; AB011365
DDBJ; AF246457
DDBJ; AF246458
CoDingSequence; AAD40119.1
CoDingSequence; AAD40118.1
CoDingSequence; BAA36485.1
CoDingSequence; CAA73382.2
CoDingSequence; BAA32540.1
CoDingSequence; AAF63385.1
CoDingSequence; AAF63386.1
SWISS-2DPAGE; O88275
HSSP; HSSP ENTRY: 1nyx
HSSP; SWISS-3DIMAGE: Q96J12
HSSP; PDB: 1nyx
; O88275
TRANSFAC; T05329
TRANSFAC; T05330
TRANSFAC; T05331
RGD; 3371; Pparg.
GO:0006631; P:fatty acid metabolism; TAS.
GO:0045598; P:regulation of adipocyte differentiation; IDA.
GO:0006357; P:regulation of transcription from Pol II pro...; IEP.
InterPro; IPR000536; Hrmon_recept_lig.
InterPro; IPR001723; Stdhrmn_receptor.
InterPro; IPR008946; Str_ncl_receptor.
InterPro; IPR001628; Znf_C4steroid.
InterPro; Graphical view of domain structure.
Pfam; PF00104; Hormone_recep; 1.
Pfam; PF00105; zf-C4; 1.
Pfam; Graphical view of domain structure.
PRINTS; PR01288; PROXISOMEPAR.
PRINTS; PR01291; PROXISOMPAGR.
PRINTS; PR00398; STRDHORMONER.
PRINTS; PR00047; STROIDFINGER.
ProDom; PD000035; Znf_C4steroid; 1.
PRODOM; O88275; [Domain structure / List of seq.sharing at least 1 domain]
PRODOM:List of seq.sharing at least 1 domain; O88275
SMART; SM00430; HOLI; 1.
SMART; SM00399; ZnF_C4; 1.
PROSITE; PS00031
PROSITE; PS51030
CMR; O88275.
HOVERGEN; O88275; [Family / Alignment / Tree]
BLOCKS; O88275.
ProtoNet; O88275.
ProtoMap; O88275.
PRESAGE; O88275.
ModBase; O88275.
DIP; O88275.
Button bar
M.Mokrane, F.Horn (nucleardbcmbi.kun.nl), 20-Apr-2005