2005, NucleaRDB.
100 200
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CONSENSUS PGAGRCDYCAFDKCGIKGEKPEPYASENQGGGAPGENEPEIDSGAANIPELILELLKCEPDEDQVQAKIMACLQEIAASQ
STF1_MOUSE PLAGYL.YPAFSNRTIKSEYPEPYASPPQQPGPP.YSYPEPFSGGPNVPELILQLLQLEPEEDQVRARIVGCLQEPAKSR
RXRA_HUMAN RQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVERILEAELAVEPKTETYVEANMGLNPSS.
RORB_RAT SGQPSPDQSGLDMTGIKQIKQEpySSFNNGQLAPGITMSEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYq
300 310 320 400 500 510
|=========|=========|== |=========||=========|==
CONSENSUS ARKDKLAAFGLLCKMADQTFFSIVDWARRCIFFKELEVADQMKLLQNCWSELLILDHIYRQVQHGDEDLFALGTGQEGEL
STF1_MOUSE ..SDQPAPFSLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQNCWSELLVLDHIYRQVQYGKEDSILLVTGQEVEL
RXRA_HUMAN ....PNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATG....LHV
RORB_RAT ..KSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLF......EGKY
600 700 710 800 810 900 910 920
|===== |=========|====== |=========|= |=========|=========|
CONSENSUS STIASQAGSLLHNLVLRAQELVLQLRALQFDQQEFVCLKFLILFSLDRKFLENHQLVEDAQEKANAALLDYTLCHYPHCG
STF1_MOUSE STVAVQAGSLLHSLVLRAQELVLQLHALQLDRQEFVCLKFLILFSLDVKFLNNHSLVKDAQEKANAALLDYTLCHYPHCG
RXRA_HUMAN HRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQP
RORB_RAT GGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLLEPRKVQKLQEKIYFALQHVIQKNHLDDE
1100 1110 1200
|=========|========= |=======
CONSENSUS DKFGQLLLCLPEIRAISMQAEEYLYHKHLGGDMPRNNLLIEMLHAKQP
STF1_MOUSE DKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEMLQAKQT................................
RXRA_HUMAN GRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQ................................
RORB_RAT TLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNP................................
The top layer shows the consensus sequence. Residues are coloured after their physico-chemical properties. (GPX black; positive blue; negative red; CM yellow; H dark purple; NQ light purple; all others green).