NucleaRDB Special clustering for SF1 mouse (ROR)

The logo  2005, NucleaRDB.
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CONSENSUS          PGAGRCDYCAFDKCGIKGEKPEPYASENQGGGAPGENEPEIDSGAANIPELILELLKCEPDEDQVQAKIMACLQEIAASQARKDKLAAFGLLCKMADQTFFSIVDWARRCIFFKELEVADQMKLLQNCWSELLILDHIYRQVQHGDEDLFALGTGQEGELSTIASQAGSLLHNLVLRAQELVLQLRALQFDQQEFVCLKFLILFSLDRKFLENHQLVEDAQEKANAALLDYTLCHYPHCGDKFGQLLLCLPEIRAISMQAEEYLYHKHLGGDMPRNNLLIEMLHAKQP                                                                                                     
STF1_MOUSE         PLAGYL.YPAFSNRTIKSEYPEPYASPPQQPGPP.YSYPEPFSGGPNVPELILQLLQLEPEEDQVRARIVGCLQEPAKSR..SDQPAPFSLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQNCWSELLVLDHIYRQVQYGKEDSILLVTGQEVELSTVAVQAGSLLHSLVLRAQELVLQLHALQLDRQEFVCLKFLILFSLDVKFLNNHSLVKDAQEKANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEMLQAKQT
RXRA_HUMAN         RQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVERILEAELAVEPKTETYVEANMGLNPSS.....PNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATG....LHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQ
RORB_RAT           SGQPSPDQSGLDMTGIKQIKQEpySSFNNGQLAPGITMSEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYq..KSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLF......EGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLLEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNP

The top layer shows the consensus sequence. Residues are coloured after their physico-chemical properties. (GPX black; positive blue; negative red; CM yellow; H dark purple; NQ light purple; all others green).


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