NucleaRDB: 2F COUP-TF-like (COUP-TF,SVP,EAR2)

Available data

• Database cross-references for sequences in this family.

• Corresponding cDNAs and pairwise alignments.

• Multiple sequence alignment in:
  • HSSP format
    
  • MSF (50 AA wide) or long MSF format
    
  • mview (80 AA wide) or long mview format.

• Profile used to obtain these alignments.

• Phylogenetic tree with : <= 20 sequences.

• Important residues obtained by CMA. Correlated mutations in mview format.

• MSF alignment with point mutations (MuteXt data only)
• List of sequences for which point mutations are available (MuteXt data only)

Sub-families

• 2F1 COUP-TFI
• 2F2 COUP-TFII
• 2F3 Seven-up (SVP)
• 2F4 COUP-TFIII
• 2F5 Seven-up related (SVP46)
• 2F6 V-erbA related protein (EAR2)
• 2F Other

Super-families

• 2 HNF4-like (HNF4,RXR,TLL,COUP,USP)
• List of all families