NucleaRDB 2D1 DHR78

The logo  2005, NucleaRDB. 
('WHAT IF created MSF file')
Date= 2005-04-20 19:47:31
 
 Symbol comparison table: WHAT IF profile
                  ~GapWeight: 3.0
            ~GapLengthWeight: 0.1
 WHAT IF.Msf MSF:   0  Type: P  2005-04-20  12:00  Check:    0  ..
 
 Name: Q8IPT4_DROME        Len:   601  Check: 2625  Weight:  1.00
 Name: HR78_DROME          Len:   601  Check: 1260  Weight:  1.00
 Name: Q9VP28_DROME        Len:   601  Check: 2226  Weight:  1.00
 
//
 
                   1                                                   50
Q8IPT4_DROME       MDGVKVETFI KSEENRAMPL IGGGSASGGT PLPGGGVGMG AGASATLSVE
HR78_DROME         MDGVKVETFI KSEENRAMPL IGGGSASGGT PLPGGGVGMG AGASATLSVE
Q9VP28_DROME       MDGVKVETFI KSEENRAMPL IGGGSASGGT PLPGGGVGMG AGASATLSVE
 
                   51                                                 100
Q8IPT4_DROME       LCLVCGDRAS GRHYGAISCE GCKGFFKRSI RKQLGYQCRG AMNCEVTKHH
HR78_DROME         LCLVCGDRAS GRHYGAISCE GCKGFFKRSI RKQLGYQCRG AMNCEVTKHH
Q9VP28_DROME       LCLVCGDRAS GRHYGAISCE GCKGFFKRSI RKQLGYQCRG AMNCEVTKHH
 
                   101                                                150
Q8IPT4_DROME       RNRCQFCRLQ KCLASGMRSD SVQHERKPIV DRKEGIIAAA GSSSTSGGGN
HR78_DROME         RNRCQFCRLQ KCLASGMRSD SVQHERKPIV DRKEGIIAAA GGSSTSGGGN
Q9VP28_DROME       RNRCQFCRLQ KCLASGMRT. .VQHERKPIV DRKEGIIAAA GSSSTSGGGN
 
                   151                                                200
Q8IPT4_DROME       GSSTYLSGKS GYQQGRGKGH SVKAESAATP PVHSAPATAF NLNENIFPMG
HR78_DROME         GSSTYLSGKS GYQQGRGKGH SVKAESAATP PVHSAPATAF NLNENIFPMG
Q9VP28_DROME       GSSTYLSGKS GYQQGRGKGH SVKAESAATP PVHSAPATAF NLNENIFPMG
 
                   201                                                250
Q8IPT4_DROME       LNFAELTQTL MFATQQQQQQ QQQHQQSGSY SPDIPKADPE DDEDDSMDNS
HR78_DROME         LNFAELTQTL MFATQQQQQQ QQQHQQSGSY SPDIPKADPE DDEDDSMDNS
Q9VP28_DROME       LNFAELTQTL MFATQQQQQQ QQQHQQSGSY SPDIPKADPE DDEDDSMDNS
 
                   251                                                300
Q8IPT4_DROME       STLCLQLLAN SASNNNSQHL NFNAGEVPTA LPTTSTMGLI QSSLDMRVIH
HR78_DROME         STLCLQLLAN SASNNNSQHL NFNAGEAPTA LPTTSTMGLI QSSLDMRVIH
Q9VP28_DROME       STLCLQLLAN SASNNNSQHL NFNAGEVPTA LPTTSTMGLI QSSLDMRVIH
 
                   301                                                350
Q8IPT4_DROME       KGLQILQPIQ NQLERNGNLS VKPECDSEAE DSGTEDAVDA ELEHMELDFE
HR78_DROME         KGLQILQPIQ NQLERNGNLS VKPECDSEAE DSGTEDAVDA ELEHMELDFE
Q9VP28_DROME       KGLQILQPIQ NQLERNGNLS VKPECDSEAE DSGTEDAVDA ELEHMELDFE
 
                   351                                                400
Q8IPT4_DROME       CGGNRSGGSD FAINEAVFEQ DLLTDVQCAF HVQPPTLVHS YLNIHYVCET
HR78_DROME         CGGNRSGGSD FAINEAVFEQ DLLTDVQCAF HVQPPTLVHS YLNIHYVCET
Q9VP28_DROME       CGGNRSGGSD FAINEAVFEQ DLLTDVQCAF HVQPPTLVHS YLNIHYVCET
 
                   401                                                450
Q8IPT4_DROME       GSRIIFLTIH TLRKVPVFEQ LEAHTQVKLL RGVWPALMAI ALAQCQGQLS
HR78_DROME         GSRIIFLTIH TLRKVPVFEQ LEAHTQVKLL RGVWPALMAI ALAQCQGQLS
Q9VP28_DROME       GSRIIFLTIH TLRKVPVFEQ LEAHTQVKLL RGVWPALMAI ALAQCQGQLS
 
                   451                                                500
Q8IPT4_DROME       VPTIIGQFIQ STRQLADIDK IEPLKISKMA NLTRTLHDFV QELQSLDVTD
HR78_DROME         VPTIIGQFIQ STRQLADIDK IEPLKISKMA NLTRTLHDFV QELQSLDVTD
Q9VP28_DROME       VPTIIGQFIQ STRQLADIDK IEPLKISKMA NLTRTLHDFV QELQSLDVTD
 
                   501                                                550
Q8IPT4_DROME       MEFGLLRLIL LFNPTLLQQR KERSLRGYVR RVQLYALSSL RRQGGIGGGE
HR78_DROME         MEFGLLRLIL LFNPTLLQQR KERSLRGYVR RVQLYALSSL RRQGGIGGGE
Q9VP28_DROME       MEFGLLRLIL LFNPTLLQQR KERSLRGYVR RVQLYALSSL RRQGGIGGGE
 
                   551                                                600
Q8IPT4_DROME       ERFNVLVARL LPLSSLDAEA MEELFFANLV GQMQMDALIP FILMTSNTSG
HR78_DROME         ERFNVLVARL LPLSSLDAEA MEELFFANLV GQMQMDALIP FILMTSNTSG
Q9VP28_DROME       ERFNVLVARL LPLSSLDAEA MEELFFANLV GQMQMDALIP FILMTSNTSG
 
                   601                                                   
Q8IPT4_DROME       L
HR78_DROME         L
Q9VP28_DROME       L
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