NucleaRDB Groups of residues showing correlated mutational behaviour
2005, NucleaRDB.
**********************************************************************
*** ***
*** Files used in the CMA analysis ***
*** ***
**********************************************************************
1 : HNF4A_HUMAN 465 Q9NQH0 HNF4A -- Hepatocyte nuclear factor 4-al
2 : HNF4A_RAT 465 P22449 Hnf4a -- Hepatocyte nuclear factor 4-al
3 : Q8CFY1_MOUSE 474 Q8CFY1 Hnf4a -- Hepatic nuclear factor 4, alph
4 : HNF4A_MOUSE 465 P49698 Hnf4a -- Hepatocyte nuclear factor 4-al
5 : Q9JJI9_TAMSI 455 Q9JJI9 HNF-4 -- Hepatocyte nuclear factor 4.
6 : Q7YRQ5_BOVIN 455 Q7YRQ5 Hepatocyte nuclear factor 4alp
7 : Q6B4V6_HUMAN 452 Q6B4V6 HNF4A -- Hepatocyte nuclear factor 4 al
8 : Q5QPB7_HUMAN 467 Q5QPB7 GD:HNF4-- OTTHUMP00000031064.
9 : Q6B4V7_HUMAN 442 Q6B4V7 HNF4A -- Hepatocyte nuclear factor 4 al
10 : HNF4A_XENLA 455 Q91766 HNF4A -- Hepatocyte nuclear factor 4-al
11 : Q8AVK3_XENLA 464 Q8AVK3 Hnf4-prov protein.
12 : Q6PHH5_BRARE 463 Q6PHH5 hnf4a -- Hnf4a protein.
13 : Q8AXB6_BRARE 454 Q8AXB6 hnf4a -- Hepatocyte nuclear factor 4 al
14 : Q5QPB8_HUMAN 417 Q5QPB8 GD:HNF4-- OTTHUMP00000065417.
15 : Q6B4V5_HUMAN 395 Q6B4V5 HNF4A -- Hepatocyte nuclear factor 4 al
**********************************************************************
*** ***
*** Summarized correlation networks ***
*** ***
**********************************************************************
10
123456789012345
4 ( 0) AAAAAAVIVAAAAAV
5 ( 0) DDDDDDSLSDDDDDS
6 ( 0) YYYYYYVLVYYYYYV
9 ( 0) AAAAAAPRPAAAAAP
11 ( 0) DDDDDDGRGDDDDDG
23 ( 0) QQQQQQPGPQQQQQP
25 ( 0) LLLLLLEDELLLLLE
10
123456789012345
8 ( 0) AAAAAAAAAEEEEAA
36 ( 0) GGGGGGGGGVVSSGG
47 ( 0) VVVVVVVVVIIAAVV
48 ( 0) SSSSSSSSSNNGGSS
49 ( 0) AAAAAAAAASSTTAA
147 ( 147) LLLLLLLLLIIIILL
161 ( 0) SSSSSSSSSGGPPSS
162 ( 0) GGGGGGGGGVVIIGG
163 ( 0) IIIIIIIIILLLLII
169 ( 0) AAAAAAAAAGGTTAA
184 ( 341) EEEEEEEEEQQQQEE
229 ( 0) VVVVVVVVVMMMMVV
233 ( 0) VVVVVVVVVIIIIVV
240 ( 0) YYYYYYYYYRRHHYY
242 ( 0) VVVVVVVVVIIIIVV
245 ( 648) HHHHHHHHHNNNNHH
250 ( 653) AAAAAAAAAEEEEAA
252 ( 0) MMMMMMMMMVVVVMM
256 ( 739) SSSSSSSSSAAAASS
297 ( 937) GGGGGGGGGTTSSGG
302 ( 942) LLLLLLLLLMMMMLL
304 ( 944) SSSSSSSSSYYYYSS
349 ( 0) IIIIIIIIIVVVVII
390 ( 0) GGGGGGGGGAASSGG
404 ( 0) SSSSSSSSSHHHHSS
10
123456789012345
22 ( 0) VVVVVVAGAMMMMVA
29 ( 0) NNNNNNYGYTTTTNY
10
123456789012345
42 ( 0) PSSSPPPPPSSAAPP
176 ( 333) ATTTAAAAAIIMMAA
10
123456789012345
203 ( 447) PLLLLPPPPPPPPPP
445 ( 0) ATTTTAAAAAAAAAA
10
123456789012345
279 ( 853) YCCCCCYYYCCCCYY
444 ( 0) VIIIIIVVVIIIIVV
10
123456789012345
385 ( 0) MMMMMMMMMVVVVAA
389 ( 0) MMMMMMMMMLLLLRR
402 ( 0) HHHHHHHHHQQPPTT
439 ( 0) LLLLLLLLLIIMMCC
440 ( 0) LLLLLLLLLVVAARR
441 ( 0) PPPPPPPPPHHSSFF
443 ( 0) AAAAAAAAATTVVQQ
10
123456789012345
391 ( 0) TTTTTTTTTTTNNWW
396 ( 0) AAAAAAAAAAATTPP
397 ( 0) NNNNNNNNNNNAAGG
398 ( 0) TTTTTTTTTTTNNDD