NucleaRDB: 1H Ecdysone-like (ECR,LXR,FXR)

Available data

• Database cross-references for sequences in this family.

• Corresponding cDNAs and pairwise alignments.

• Multiple sequence alignment in:
  • HSSP format
    
  • MSF (50 AA wide) or long MSF format
    
  • mview (80 AA wide) or long mview format.

• Profile used to obtain these alignments.

• Phylogenetic tree with : <= 20 or <= 40 sequences.

• Important residues obtained by CMA. Correlated mutations in mview format.

• MSF alignment with point mutations (MuteXt data only)
• List of sequences for which point mutations are available (MuteXt data only)

Sub-families

• 1H1 Ecdysone
• 1H2 Oxysterol LXR beta
• 1H3 Oxysterol LXR alpha
• 1H4 Farnesoid FXR

Super-families

• 1 Thyroid hormone like (TR,RAR,ROR,PPAR,VDR)
• List of all families