NucleaRDB: 1 Thyroid hormone like (TR,RAR,ROR,PPAR,VDR)

Available data

• Database cross-references for sequences in this family.

• Corresponding cDNAs and pairwise alignments.

• Multiple sequence alignment in:
  • HSSP format
    
  • MSF (50 AA wide) or long MSF format
    
  • mview (80 AA wide) or long mview format.

• Profile used to obtain these alignments.

• Phylogenetic tree with : <= 20 or <= 40 or <= 60 or <= 80 sequences.

• Important residues obtained by CMA. Correlated mutations in mview format.

• MSF alignment with point mutations (MuteXt data only)
• List of sequences for which point mutations are available (MuteXt data only)

Sub-families

• 1A Thyroid hormone (TR)
• 1B Retinoic acid (RAR)
• 1C Peroxisome proliferator activated (PPAR)
• 1D REV-ERB (NRD1,NRD2,E75)
• 1E Ecdysone-inducible protein E78
• 1F RAR-related orphan receptor (ROR,HR3)
• 1G CNR14
• 1H Ecdysone-like (ECR,LXR,FXR)
• 1I Vitamin D3-like (VDR,PXR,CAR)
• 1J DHR96
• 1K NHR1

Super-families

• List of all families