KChannelDB Human potassium channels 1 TM
2005, KChannelDB.
SEQLENGTH 129
NALIGN 7
REMARK : WARNING: This alignment was generated fully automatically.
REMARK : It therefore highly likely that this alignment contains errors.
REMARK : We give no guarantees and can not be held responsible for errors.
REMARK : Small characters indicate insertions in the sequences relative
REMARK : to the profile ocurred.
Date= 2005-08-12 14:12:42
NOTATION : NR : Number of the sequence in the database.
NOTATION : ID : Identifier of the sequence.
NOTATION : STRID : Not relevant in this case.
NOTATION : %ID : Percent of residues identical with the consensus sequence.
NOTATION : %SIM : Convolution of sequence with profile
NOTATION : IFIR,ILAS : Not used.
NOTATION : JFIR,JLAS : Not used.
NOTATION : LALI : Not used.
NOTATION : NGAP : Not used.
NOTATION : LGAP : Not used.
NOTATION : LSEQ2 : Total length of the seq.
NOTATION : SEQW : Weight of the seq.
## PROTEINS : EMBL/SWISSPROT identifier and alignment statistics
NR. ID %IDE %SIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM SEQW PROTEIN
1 : KCE1L_HUMAN 0.59 0.92 0 0 0 0 0 0 0 142 Q9UJ90 0.5781 KCNE1L -- Potassium voltage-gated channel subfamily E member 1-like protein (AMME syndrome candidate gene 2 protein) (AM
2 : Q5JWV7_HUMAN 0.59 0.92 0 0 0 0 0 0 0 142 Q5JWV7 0.5781 GD:KCNE-- Potassium voltage-gated channel, Isk-related family, member 1- like.
3 : Q52LJ5_HUMAN 0.50 0.85 0 0 0 0 0 0 0 123 Q52LJ5 0.5801 KCNE2 -- Potassium voltage-gated channel, Isk-related family, member 2.
4 : KCNE2_HUMAN 0.50 0.85 0 0 0 0 0 0 0 123 Q9Y6J6 0.5801 KCNE2 -- Potassium voltage-gated channel subfamily E member 2 (Minimum potassium ion channel-related peptide 1) (Potass
5 : KCNE1_HUMAN 0.42 0.81 0 0 0 0 0 0 0 129 P15382 0.6497 KCNE1 -- Potassium voltage-gated channel subfamily E member 1 (IKs producing slow voltage-gated potassium channel beta
6 : KCNE4_HUMAN 0.29 0.70 0 0 0 0 0 0 0 170 Q8WWG9 0.6789 KCNE4 -- Potassium voltage-gated channel subfamily E member 4 (Minimum potassium ion channel-related peptide 3) (Potass
7 : KCNE3_HUMAN 0.26 0.51 0 0 0 0 0 0 0 103 Q9Y6H6 0.6595 KCNE3 -- Potassium voltage-gated channel subfamily E member 3 (Minimum potassium ion channel-related peptide 2) (Potass
## ALIGNMENTS 1 - 7
SeqNo PDBNo AA STRUCT Gap-O Gap-E ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 0 M 1.01 0.10 7 68 MMSSMML
2 0 N 1.01 0.10 7 48 NNTTIEK
3 0 L 1.01 0.10 7 57 CCLLLPA
4 0 S 1.00 0.10 7 80 SSSSSLL
5 0 N 1.02 0.11 7 80 EENNNNN
6 0 S 1.00 0.10 7 57 SSFFTSA
7 0 T 1.02 0.11 7 80 QQTTTTT
8 0 Q 1.00 0.10 7 48 RRQQAHL
9 0 L 1.00 0.10 7 48 LLTTVPH
10 0 L 0.99 0.10 7 48 RRLLTGS
11 0 T 1.00 0.10 7 57 TTEEPTN
12 0 L 1.00 0.10 7 57 LLDDFAL
13 0 L 1.01 0.11 7 68 LLVVLAL
14 0 S 1.00 0.10 7 57 SSFFTSC
15 0 R 1.00 0.10 7 73 RRRRKSR
16 0 L 1.01 0.10 7 57 LLRRLSP
17 0 I 0.98 0.09 7 48 LLIIWPG
18 0 L 0.99 0.10 7 57 LLFFQLP
19 0 E 0.99 0.10 7 68 EEIIEEG
20 0 L 0.98 0.09 7 66 LLTTTSL
21 0 H 0.98 0.09 6 42 HHYYVR-
22 0 H 0.98 0.09 6 42 HHMMQA-
23 0 D 0.98 0.09 6 42 RRDDQA-
24 0 G 1.00 0.10 7 80 GGNNGGG
25 0 G 0.99 0.10 7 55 NNWWGGP
26 0 A 1.00 0.10 6 42 AARRN-D
27 0 Q 0.99 0.10 6 42 SSQQM-N
28 0 G 1.00 0.10 6 42 GGNNS-Q
29 0 T 1.00 0.10 6 49 LLTTG-T
30 0 G 1.00 0.10 6 42 GGTTL-E
31 0 A 1.00 0.10 6 61 aaAAA-E
32 0 E 1.00 0.10 6 47 ggEER-R
33 0 R 1.00 0.10 6 57 RRQQR-R
34 0 E 1.00 0.10 6 52 EEEES-A
35 0 A 0.99 0.09 6 42 VVAAP-S
36 0 L 0.99 0.09 6 49 TTLLR-L
37 0 S 0.99 0.10 7 57 SSQQSGP
38 0 A 0.99 0.10 7 68 AAAASSG
39 0 K 1.00 0.10 7 61 KKKKDGR
40 0 G 0.99 0.09 7 57 GGVVGND
41 0 D 0.99 0.09 7 73 DDDDKGD
42 0 A 1.00 0.10 7 55 DDAALNN
43 0 E 1.00 0.10 7 68 AAeeEES
44 0 Y 8.00 0.40 7 68 YYiiAYY
45 0 L 8.00 0.40 7 73 LLLLLFM
46 0 Y 8.00 0.40 7 100 YYYYYYY
47 149 I 8.00 0.40 7 68 IILLVII
48 150 L 8.00 0.40 7 80 LLMMLLL
49 151 V 8.00 0.40 7 57 LLVVMVF
50 152 V 8.00 0.40 7 64 IIMMVVV
51 153 M 8.00 0.40 7 68 MMIILMM
52 154 G 8.00 0.40 7 57 IIGGGSF
53 155 F 8.00 0.40 7 68 FFMMFFL
54 156 F 8.00 0.40 7 77 YYFFFYF
55 157 A 8.00 0.40 7 64 AASSGGA
56 158 F 8.00 0.40 7 57 CCFFFIV
57 159 F 8.00 0.40 7 55 LLIIFFT
58 160 A 8.00 0.40 7 48 AAIITLV
59 161 G 8.00 0.40 7 57 GGVVLIG
60 162 G 8.00 0.40 7 68 GGAAGGS
61 163 I 8.00 0.40 7 77 LLIIIIL
62 164 I 8.00 0.40 7 64 IILLMMI
63 165 L 8.00 0.40 7 80 LLVVLLL
64 166 S 8.00 0.40 7 64 AASSSGG
65 0 Y 8.00 0.40 7 80 YYTTYYY
66 0 T 8.00 0.40 7 57 TTVVIMT
67 0 R 1.04 0.12 7 77 RRKKRKR
68 0 S 1.04 0.12 7 100 SSSSSSS
69 0 K 1.03 0.11 7 77 RRKKKKR
70 0 K 1.03 0.11 7 77 KKRRKRK
71 0 L 1.02 0.11 7 66 LLRRLRV
72 0 E 1.02 0.11 7 68 VVEEEED
73 0 H 1.01 0.11 7 64 EEHHHkK
74 0 S 1.02 0.11 7 68 AASSSsR
75 0 N 1.01 0.10 7 64 KKNNNSS
76 0 D 1.03 0.11 7 86 DDDDDLD
77 0 P 1.02 0.11 7 68 EEPPPLP
78 0 Y 1.01 0.10 7 57 PPYYFLY
79 0 H 1.01 0.11 7 57 SSHHNLH
80 0 Q 1.01 0.10 7 68 QQQQVYV
81 0 Y 1.02 0.11 7 68 AAYYYKY
82 0 I 1.01 0.11 7 68 CCIIIDI
83 0 A 0.99 0.10 7 55 AAVVEEK
84 0 E 0.99 0.09 7 73 EEEESEN
85 0 D 0.99 0.10 7 64 HHDDDRR
86 0 E 0.98 0.09 5 31 EE--ALV
87 0 W 1.00 0.10 7 86 WWWWWWS
88 0 Q 0.99 0.10 7 57 AAQQQGM
89 0 E 1.00 0.10 7 68 PPEEEEI
90 0 K 0.99 0.10 6 49 GGKKKA-
91 0 G 0.98 0.09 6 42 GGYYDM-
92 0 K 1.00 0.10 6 57 AAKKKK-
93 0 L 0.99 0.09 6 42 LLSSAP-
94 0 T 0.98 0.09 4 23 TT--YL-
95 0 A 0.99 0.09 4 23 AA--VP-
96 0 Q 1.00 0.10 6 49 DDQQQV-
97 0 A 0.99 0.10 6 49 AAIIAV-
98 0 E 0.99 0.09 6 42 EELLRS-
99 0 A 0.98 0.09 6 42 AANNVG-
100 0 L 0.99 0.09 6 57 AALLLL-
101 0 E 0.98 0.09 6 49 AAEEER-
102 0 E 0.97 0.09 6 47 GGEESS-
103 0 S 0.98 0.09 6 52 SSSSYV-
104 0 Q 0.98 0.09 6 49 QQKKRQ-
105 0 A 0.98 0.09 6 52 AAAASV-
106 0 E 0.98 0.09 6 42 EETTCP-
107 0 G 0.98 0.09 6 42 GGIIYL-
108 0 H 0.98 0.09 6 42 RRHHVM-
109 0 E 0.98 0.09 6 42 RREEVL-
110 0 N 0.99 0.09 6 49 QQNNEN-
111 0 I 0.98 0.09 6 42 LLIINM-
112 0 A 0.99 0.09 6 42 AAGGHL-
113 0 A 0.99 0.09 6 42 SSAALQ-
114 0 A 0.99 0.09 6 56 EEAAAE-
115 0 G 0.98 0.09 6 52 GGGGIS-
116 0 F 0.98 0.09 6 42 LLFFEV-
117 0 K 0.98 0.09 6 42 PPKKQA-
118 0 A 0.98 0.09 6 47 AAMMPP-
119 0 L 0.98 0.09 6 42 LLSSNA-
120 0 A 0.98 0.09 6 42 AAPPTL-
121 0 Q 0.98 0.09 4 23 QQ--HS-
122 0 G 0.99 0.09 4 23 GG--LC-
123 0 A 0.98 0.09 4 23 AA--PT-
124 0 E 0.98 0.09 4 26 EE--EL-
125 0 R 0.98 0.09 4 23 RR--TC-
126 0 V 0.98 0.09 4 23 VV--KS-
127 0 M 0.98 0.09 2 7 ----PM-
128 0 E 0.98 0.09 2 7 ----SE-
129 0 G 0.98 0.09 2 7 ----PG-
## FULL FILE NAMES
1 KCNE1L -- Potassium voltage-gated channel subfamily E member 1-like protein (AMME syndrome candidate gene 2 protein) (AMMECR2 protein).
2 GD:KCNE-- Potassium voltage-gated channel, Isk-related family, member 1- like.
3 KCNE2 -- Potassium voltage-gated channel, Isk-related family, member 2.
4 KCNE2 -- Potassium voltage-gated channel subfamily E member 2 (Minimum potassium ion channel-related peptide 1) (Potassium channel beta subunit MiRP1) (MinK-related peptide 1).
5 KCNE1 -- Potassium voltage-gated channel subfamily E member 1 (IKs producing slow voltage-gated potassium channel beta subunit Mink) (Minimal potassium channel) (Delayed rectifier potassium channel subunit IsK).
6 KCNE4 -- Potassium voltage-gated channel subfamily E member 4 (Minimum potassium ion channel-related peptide 3) (Potassium channel beta subunit MiRP3) (MinK-related peptide 3).
7 KCNE3 -- Potassium voltage-gated channel subfamily E member 3 (Minimum potassium ion channel-related peptide 2) (Potassium channel beta subunit MiRP2) (MinK-related peptide 2).
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