KChannelDB Potassium channel beta subunits K(VCa)beta

The logo  2005, KChannelDB.
                                         140       150                                                                                                                                                  
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CONSENSUS          GKKLVTAQKRGEDRAICLGLAMVVCSVIMYFILGTTLLPLYQKSVWTEESCCHLIETNIGFQCGLDCKKVSQYPCLQVNL                                                                                                     
KCMB1_RAT          GKKLVMAQKRGETRALCLGVAMVVCAAITYYILGTTVLPLYQKSVWTQESTCHLVETNIKDQEELEGRKVPQYPCLWVNV
KCMB1_MOUSE        GKKLVMAQKRGETRALCLGVAMVVCAAITYYVLGTTVLPLYQKSVWTQESICHLIETNIKDQEELEGKKVPQYPCLWVNV
KCMB1_RABIT        GKKLVMAQKRGETRALCLGVAMVMCAVITYYILGTTMLPLYQKSVWTQESLCRLIETNIRDQEELEGKKVPQYPCLWVNV
KCMB1_HUMAN        VKKLVMAQKRGETRALCLGVTMVVCAVITYYILVTTVLPLYQKSVWTQESKCHLIETNIRDQEELEGKKVPQYPCLWVNV
KCMB1_BOVIN        GKKLVMAQRRGETRALCLGVAMVVGAVITYYILGTTVLPLYQKSVWTQESTCHLIETNIRDQEELEGKRVPQYPCLWVNV
KCMB1_CANFA        GKKLVMAQKRGETRALCLGVAMVMCAVIAYYILGTTMLPLYQKSVWTQKSTCHLIETNIREQEELEGKKVPQYPCLWVNV
KCMB2_MOUSE        KRKTVTALKAGEDRAILLGLAMMVCSIMMYFLLGITLLRSYMQSVWTEEAQCALletnCSFSCGPDCWKLSQYPCLqvNL
KCMB2_HUMAN        KRKTVTALKAGEDRAILLGLAMMVCSIMMYFLLGITLLRSYMQSVWTEESQCTLletnCSFSCGPDCWKLSQYPCLqvNL
KCMB2_RAT          KRKTVTALKAGEDRAILLGLAMMVCSIMMYFLLGITLLRSYMQSVWTEEAQRALletnCSFSCGPDCWKLSQYPCLqvNL
KCMB1_COTJA        AKKLVTAQKRGETRALCLGLGMVACSMMMYFFIGITIVPFYTKSVWTTETICKVLKANIKdsEGSEDEDIFHYPCLqvNL
O93393_CHICK       AKKLVTAQKRGETRALCLGLGMVACSMMMYFFIGITIVPFYTKSVWTTETICKVLKVNIKdsEGSEDEDIFHYPClwVNL
KCMB4_RAT          MAKLRVSYEYteDKSIRLGLFLIVSGILSLFIFGFCWLSplQDLQATAANCTVLSVQQIgfTCGTDCRGTSQYPCVqvNN
KCMB4_HUMAN        MAKLRVAYEYteDKSIRLGLFLIISGVVSLFIFGFCWLSplQDLQATEANCTVLSVQQIgfTCGADCRGTSQYPCVqvNN
KCMB4_MOUSE        MAKLRVSYEYteDKSIRLGLFLIVSGILSLFIFGFCWLSplQDLQATAANCTVLSVQQIgfTCGTDCRGTSQYPCVqvNN
Q6QCX8_MERUN       MAKLRVAYEYteDKSIRLGLFLIISGVVSLFIFGFCWLSplQDLQATAANCTVLSVQQLgfTCGTDCRGTSQYPCVqvNN
KCMB3_HUMAN        GKKREtvHKrgEDRAVMLGFAMMGFSVLMFFLLGTTILKPFMLSIQREESTCTAIHTDImfTCGVHCHGQGKYPCLqvNL
Q66HT3_RAT         KRKTVTALKAGEDRAILLGLAMMVCSIMMYFLLGITLLRSYMQSVWTEEAQCALletnCSFSCGPDCWKLSQYPCLqvNL
                                                                                                 240                                                                                                    
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CONSENSUS          SASGRWALLYHTEDTLDINQKCSYIPGCLDNYQEALADVEKVRANFKKEQPFYCYSDPHGNETSVLLQRLYGPQVLLHSF                                                                                                     
KCMB1_RAT          SAVGRWAMLYHTEDTRDQNQQCSYIPRNLDNYQTALVDVKKVRANFYKHHNFYCFSAPQVNETSVVYQRLYGPQILLFSF
KCMB1_MOUSE        SAVGRWAMLYHTEDTRDQNQQCSYIPRNLDNYQTALADVKKVRANFYKHHEFYCLSAPQVNETSVVYQRLYGPQVLLFSF
KCMB1_RABIT        SAVGKWAVLYHTEETRDRNQQCSYIPGSLDNYQMALADVEKVRAKFHERQVFYCFSTTQENETSVLYQRLYGPQALLASL
KCMB1_HUMAN        SAAGRWAVLYHTEDTRDQNQQCSYIPGSVDNYQTARADVEKVRAKFQEQQVFYCFSAPRGNETSVLFQRLYGPQALLFSL
KCMB1_BOVIN        SSVGRWAVLYHTEDTRDQNHQCSYIPSSLDNYQVARADVEKVRARFHENQDFFCFSTTRENETSVLYRRLYGPQSLLFSL
KCMB1_CANFA        SAVGRWAVLYHTEDTRDQNHQCSYIPGSLENYQVARADVEKVKAKFHEQQIFYCFSTTRENETTVLYRRLYGPQTLLFSL
KCMB2_MOUSE        TSSGERLLLYHTEETMKINQKCSYIPKCGNNFEESMSLVSVVMENFRRHQHFPCYSDPEGNQKSVILTKLYSSNVLFHSL
KCMB2_HUMAN        TSSGEKLLLYHTEETIKINQKCSYIPKCGKNFEESMSLVNVVMENFRKYQHFSCYSDPEGNQKSVILTKLYSSNVLFHSL
KCMB2_RAT          TSSGEKLLLYHTEETMKINQKCSYIPKCGNNFEESMSLVSVVMENFRRHQHFPCYSDPEGNQKSVILTKLYSSNVLFHSL
KCMB1_COTJA        TASGQEVMLYHTEDTLERNPKCSYVPGNSENSKEVKARIETIASNFKKYQTFPCYYDPGGMQTNVILSRLYPPKGLLFTF
O93393_CHICK       TASGQEVMLYYTEDTLERNPKCSYVPGNSENAKEVKAKIEEIANNFKKYQTFPCYYDPGGMQTNVILSRLYPPRGLLFTF
KCMB4_RAT          SESNSRALLHSDQHQLLTNPKCSYIPPCKRENQKNSESVMNWQQYWKDeqPFTCYFNQHQRPEDVLLQRTHDEIVLLHCF
KCMB4_HUMAN        SESNSRALLHSDEHQLLTNPKCSYIPPCKRENQKNLESVMNWQQYWKDeqPFTCYFNQHQRPDDVLLHRTHDEIVLLHCF
KCMB4_MOUSE        SESNSRALLHSDQHQLLTNPKCSYIPPCKRENQKNSESVMNWQQYWKDeqPFTCYFNQHQRPEDVLLQRTHDEIALLHCF
Q6QCX8_MERUN       SESNSRALLHSDQHQLLTNPKCSYIPPCKRENQKNLESVMNWQQYWKDeqPFTCYFNQHQRPENVLLHRTHDEIVLLHCF
KCMB3_HUMAN        SHPGQKALLHYNEEAVQINPKCFYTPKChrNDLLNSALDIKEFFDHKNGTPFSCFYSPASQSEDVILIKKYDQMAIFHCL
Q66HT3_RAT         TSSGEKLLLYHTEETMKINQKCSYIPKCGNNFEESMSLSP.....FPSMTLLLCGRPSW.....................
                           250                                                                                                                                                                          
                   =========|========                                                                                                                                                                   
CONSENSUS          FWPTFLLTGGVLIIAMVKLNQSLSVLAAQK                                                                                                                                                       
KCMB1_RAT          FWPTFLLTGGLLIIAMVKLNRSLSVLAAQK..................................................
KCMB1_MOUSE        FWPTFLLTGGLLLIAMVKLNRSLSILAAQK..................................................
KCMB1_RABIT        FWPTFLLTGGLLIIAMVKINRSLSILAAQK..................................................
KCMB1_HUMAN        FWPTFLLTGGLLIIAMVKSNQYLSILAAQK..................................................
KCMB1_BOVIN        FWPTFLLTGGLLIIVMVKINQSLSILAAQR..................................................
KCMB1_CANFA        FWPTFLLTGGLLIIAMVKINQSLSILAAQR..................................................
KCMB2_MOUSE        FWPTCMMAGGVAIVAMVKLTQYLSLLCERI..................................................
KCMB2_HUMAN        FWPTCMMAGGVAIVAMVKLTQYLSLLCERI..................................................
KCMB2_RAT          FWPTCMMAGGVAIVAMVKLTQYLSLLCERI..................................................
KCMB1_COTJA        LWPTLMFTGGCLIIVLVKISQYFSVLSARQ..................................................
O93393_CHICK       LWPTLMFTGGCLIIVLVKISQYVSVLSARQ..................................................
KCMB4_RAT          LWPVVAFVVGVLIVVLTICAKSLAVKaaMK..................................................
KCMB4_HUMAN        LWPLVTFVVGVLIVVLTICAKSLAVKaaMK..................................................
KCMB4_MOUSE        LWPVVAFVVGVLIVVLTICAKSLAVKaaMK..................................................
Q6QCX8_MERUN       LWPVVTFVVGVLIVVLTICAKSLAVKaaMK..................................................
KCMB3_HUMAN        FWPSLTLLGGALIVGMVRLTQHLSLLCEKY..................................................
Q66HT3_RAT         ................................................................................

The top layer shows the consensus sequence. Residues are coloured after their physico-chemical properties. (GPX black; positive blue; negative red; CM yellow; H dark purple; NQ light purple; all others green).


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