KChannelDB KCNS (Kv9)
2005, KChannelDB.
('WHAT IF created MSF file')
Date= 2005-08-17 12:42:15
Symbol comparison table: WHAT IF profile
~GapWeight: 3.0
~GapLengthWeight: 0.1
WHAT IF.Msf MSF: 0 Type: P 2005-08-17 12:00 Check: 0 ..
Name: KCNS3_RABIT Len: 477 Check: 5437 Weight: 1.00
Name: KCNS3_RAT Len: 477 Check: 4478 Weight: 1.00
Name: KCNS3_HUMAN Len: 477 Check: 3182 Weight: 1.00
Name: Q8BQZ8_MOUSE Len: 477 Check: 4320 Weight: 1.00
Name: Q5BLW6_BOVIN Len: 477 Check: 5767 Weight: 1.00
Name: KCNS2_RAT Len: 477 Check: 8472 Weight: 1.00
Name: KCNS2_MOUSE Len: 477 Check: 8551 Weight: 1.00
Name: KCNS2_HUMAN Len: 477 Check: 8634 Weight: 1.00
Name: KCNS1_RAT Len: 477 Check: 4885 Weight: 1.00
Name: KCNS1_MOUSE Len: 477 Check: 3526 Weight: 1.00
Name: KCNS1_HUMAN Len: 477 Check: 6686 Weight: 1.00
//
1 50
KCNS3_RABIT ...MVFGEFF HRPGPDEEln LNVGGFKQSV DQSTLLRFPH TRLGKLLTCH
KCNS3_RAT ...MVFGEFF HRPGQDEEln LNVGGFKQSV DQSTLLRFPH TRLGKLLTCH
KCNS3_HUMAN ...MVFGEFF HRPGQDEEln LNVGGFKQSV DQSTLLRFPH TRLGKLLTCH
Q8BQZ8_MOUSE ...MVFGEFF HRPGQDEEln LNVGGFKQSV DQSTLLRFPH TRLGKLLTCH
Q5BLW6_BOVIN ...MVFGEFF HRPGPDEEln LNVGGFKQTV DQSTLLRFPH TRLGKLLSCH
KCNS2_RAT MTRQSLWDLS ETDVEDGEIR INVGGFKRRL RSHTLLRFPE TRLGRLLLCH
KCNS2_MOUSE MTRQSLWDVS DTDVEDGEIR INVGGFKRRL RSHTLLRFPE TRLGRLLLCH
KCNS2_HUMAN MTGQSLWDVS EANVEDGEIR INVGGFKRRL RSHTLLRFPE TRLGRLLLCH
KCNS1_RAT .......MVS EFPGpdEALR VNVGGVRRLL SARALARFPG TRLGRLQAAV
KCNS1_MOUSE .......MVS EFPGpdEALR VNVGGVRRLL SARALARFPG TRLGRLQAAA
KCNS1_HUMAN GGRSTETFVS EFPGpdEALR VNVGGVRRQL SARALARFPG TRLGRLQAAA
51 100
KCNS3_RABIT SEEAILELCD DYSVADKEYY FDRNPSLFRY VLNFYYTGKL HVMEELCVFS
KCNS3_RAT SEEAILELCD DYSVADKEYY FDRNPSLFRY VLNFYYTGKL HVMEELCVFS
KCNS3_HUMAN SEEAILELCD DYSVADKEYY FDRNPSLFRY VLNFYYTGKL HVMEELCVFS
Q8BQZ8_MOUSE SEEAILELCD DYSVADKEYY FDRNPFLFRY VLNFYYTGKL HVMEELCVFS
Q5BLW6_BOVIN SEEAILELCD DYSVADKEYY FDRNPSLFRY VLNFYYTGKL HVMEELCVFS
KCNS2_RAT SREAILELCD DYDDVQREFY FDRNPELFPY VLHFYHTGKL HVMAELCVFS
KCNS2_MOUSE SREAILELCD DYDDVQREFY FDRNPELFPY VLHFYHTGKL HVMAELCVFS
KCNS2_HUMAN SREAILELCD DYDDVQREFY FDRNPELFPY VLHFYHTGKL HVMAELCVFS
KCNS1_RAT SEEQARRLCD DYDAAAREFY FDRHPGFFLG LLHFYRTGHL HVLDELCVFA
KCNS1_MOUSE SEEQARRLCD DYDAAAHEFY FDRHPGFFLG LLHFYRTGHL HVLDELCVFA
KCNS1_HUMAN SEEQARRLCD DYDEAAREFY FDRHPGFFLS LLHFYRTGHL HVLDELCVFA
101 150
KCNS3_RABIT FCQEIEYWGI NELFIDSCCS NRYQERKEEN HEKDWDQKSN DVSTDTSFEE
KCNS3_RAT FCQEIEYWGI NELFIDSCCS SRYQERKEES HEKDWDQKSN DVSTDSSFEE
KCNS3_HUMAN FCQEIEYWGI NELFIDSCCS NRYQERKEEN HEKDWDQKSH DVSTDSSFEE
Q8BQZ8_MOUSE FCQEIEYWGI NELFIDSCCS SRYQERKEES HDKDWDQKSN DVSTDSSFEE
Q5BLW6_BOVIN FCQEIEYWGI NELFLDSCCS NRYQERKEEN HEKDWDQKSN DVSTDSSFEE
KCNS2_RAT FSQEIEYWGI NEFFIDSCCS YSYHGRKVEP EQEKWDEQSD QESTTSSFDE
KCNS2_MOUSE FSQEIEYWGI NEFFIDSCCS YSYHGRKVEP EQEKWDEQSD QESTTSSFDE
KCNS2_HUMAN FSQEIEYWGI NEFFIDSCCS YSYHGRKVEP EQEKWDEQSD QESTTSSFDE
KCNS1_RAT FGQEADYWGL GENALATCCR ARYLERRV.T RPRAWDEDSd pSSVDPCPDE
KCNS1_MOUSE FGQEADYWGL GENALATCCR ARYLERRV.A RPRAWDEDSd pSSVDPCPDE
KCNS1_HUMAN FGQEADYWGL GENALAACCR ARYLERR.LT QPHAWDEDSd pSSVDPCPDE
151 200
KCNS3_RABIT SSVFEKELEK FDQLRFGQLR KKIWIRMENP AY.CLskLIA ISSLSVVLAS
KCNS3_RAT SSLFEKELEK FDELRFGQLR KKIWIRMENP AY.CLskLIA ISSLSVVLAS
KCNS3_HUMAN SSLFEKELEK FDTLRFGQLR KKIWIRMENP AY.CLskLIA ISSLSVVLAS
Q8BQZ8_MOUSE SSLFEKELEK FDELRFGQLR KKIWIRMENP AY.CLskLIA ISSLSVVLAS
Q5BLW6_BOVIN SSLFEKELEK FDKLRFGQLR KKIWIRMENP AY.CLskLIA ISSLSVVLAS
KCNS2_RAT ILAFYNDASK FDGQPLGNFR RQLWLALDNP GYSVLSRVFS VLSILVVLGS
KCNS2_MOUSE ILAFYNDASK FDGQPLGNFR RQLWLALDNP GYSVLSRVFS VLSILVVLGS
KCNS2_HUMAN ILAFYNDASK FDGQPLGNFR RQLWLALDNP GYSVLSRVFS ILSILVVMGS
KCNS1_RAT ISDVQRELAR YGAARCGRLR RRLWLTMENP GYSLPSKLFS CVSIGVVLAS
KCNS1_MOUSE ISDVQRELAR YGAARCGRLR RRLWLTMENP GYSLPSKLFS CVSIGVVLAS
KCNS1_HUMAN ISDVQRELAR YGAARCGRLR RRLWLTMENP GYSLPSKLFS CVSISVVLAS
201 250
KCNS3_RABIT IVAMCVHSMS EFQNED.... .GedPVLEGV EIACIAWFTG ELAVRLVAAP
KCNS3_RAT IVAMCVHSMS EFQNED.... .GedPVLEGV EIACIAWFTG ELAIRLVAAP
KCNS3_HUMAN IVAMCVHSMS EFQNED.... .GedPVLEGL EIACIAWFTG ELAVRLAAAP
Q8BQZ8_MOUSE IVAMCVHSMS EFQNED.... .GedPVLEGV EIACIAWFTG ELAIRLVAAP
Q5BLW6_BOVIN IVAMCIHSMS EFQNED.... .GedPVLEGV EIACIAWFTG ELVIRLVTAP
KCNS2_RAT IITMCLNSLP DFQIPDSQGN PGEDPRFEIV EHFGIAWFTF ELVARFAVAP
KCNS2_MOUSE IITMCLNSLP DFQIPDSQGN PGEDPRFEIV EHFGIAWFTF ELVARFAVAP
KCNS2_HUMAN IITMCLNSLP DFQIPDSQGN PGEDPRFEIV EHFGIAWFTF ELVARFAVAP
KCNS1_RAT IAAMCIHSLP EYQaaVAAGR SAedPVLRRL EYFCIAWFSF EVSSRLLLAP
KCNS1_MOUSE IAAMCIHSLP EYQaaVAAGR SAedPVLRRL EYFCIAWFSF EVSSRLLLAP
KCNS1_HUMAN IAAMCIHSLP EYQaaVAAGR SPedPVLRRL EYFCIAWFSF EVSSRLLLAP
251 300
KCNS3_RABIT CQKKFWKNPL NIIDFVSIIP FYATLAVDTK EEESEDIENM GKVVQILRLM
KCNS3_RAT SQKKFWKNPL NIIDFVSIIP FYATLAVDTK EEESEDIENM GKVVQILRLM
KCNS3_HUMAN CQKKFWKNPL NIIDFVSIIP FYATLAVDTK EEESEDIENM GKVVQILRLM
Q8BQZ8_MOUSE SQKKFWKNPL NIIDFVSIIP FYATLAVDTK EEESEDIENM GKVVQILRLM
Q5BLW6_BOVIN CQKKFWKNPL NIIDFVSIVP FYATLAVDTK EEESEDIENM GKVVQILRLM
KCNS2_RAT DFLKFFKNAL NLIDLMSIVP FYITLVVNLV VESSPTLANL GRVAQVLRLM
KCNS2_MOUSE DFLKFFKNAL NLIDLMSIVP FYITLVVNLV VESSPTLANL GRVAQVLRLM
KCNS2_HUMAN DFLKFFKNAL NLIDLMSIVP FYITLVVNLV VESTPTLANL GRVAQVLRLM
KCNS1_RAT STRNFFCHPL NLIDIVSVLP FYLTLLAGar GASGEELGDL GKVVQVFRLM
KCNS1_MOUSE STRNFFCHPL NLIDIVSVLP FYLTLLAGar GASGEELGDL GKVVQVFRLM
KCNS1_HUMAN STRNFFCHPL NLIDIVSVLP FYLTLLAglG DQGGKEFGHL GKVVQVFRLM
301 350
KCNS3_RABIT RIFRILKLAR HSVGLRSLGA TLRHSYHEVG LLLLFLSVGI SIFSVLIYSV
KCNS3_RAT RIFRILKLAR HSVGLRSLGA TLRHSYHEVG LLLLFLSVGI SIFSVLIYSV
KCNS3_HUMAN RIFRILKLAR HSVGLRSLGA TLRHSYHEVG LLLLFLSVGI SIFSVLIYSV
Q8BQZ8_MOUSE RIFRILKLAR HSVGLRSLGA TLRHSYHEVG LLLLFLSVGI SIFSVLIYSV
Q5BLW6_BOVIN RIFRILKLAR HSVGLRSLGA TLRHSYHEVG LLLLFLSVGI SIFSVLIYSV
KCNS2_RAT RIFRILKLAR HSTGLRSLGA TLKYSYKEVG LLLLYLSVGI SIFSVVAYTI
KCNS2_MOUSE RIFRILKLAR HSTGLRSLGA TLKYSYKEVG LLLLYLSVGI SIFSVVAYTI
KCNS2_HUMAN RIFRILKLAR HSTGLRSLGA TLKYSYKEVG LLLLYLSVGI SIFSVVAYTI
KCNS1_RAT RIFRVLKLAR HSTGLRSLGA TLKHSYREVG ILLLYLAVGV SVFSGVAYTA
KCNS1_MOUSE RIFRVLKLAR HSTGLRSLGA TLKHSYREVG ILLLYLAVGV SVFSGVAYTA
KCNS1_HUMAN RIFRVLKLAR HSTGLRSLGA TLKHSYREVG ILLLYLAVGV SVFSGVAYTA
351 400
KCNS3_RABIT EkdHTSSLTS IPICWWWATI SMTTVGYGDT HPVTLAGKLI ASTCIICGIL
KCNS3_RAT EkeLASSLTS IPICWWWATI SMTTVGYGDT HPVTLAGKII ASTCIICGIL
KCNS3_HUMAN EkdHTSSLTS IPICWWWATI SMTTVGYGDT HPVTLAGKLI ASTCIICGIL
Q8BQZ8_MOUSE EkeHKSSLTS IPICWWWATI SMTTVGYGDT HPVTLAGKII ASTCIICGIL
Q5BLW6_BOVIN EkdHTSSLTS IPVCWWWATI SMTTVGYGDT HPVTLVGKLI ASTCIICGIL
KCNS2_RAT EKEENEGLAT IPACWWWATV SMTTVGYGDV VPGTTAGKLT ASACILAGIL
KCNS2_MOUSE EKEENEGLAT IPACWWWATV SMTTVGYGDV VPGTTAGKLT ASACILAGIL
KCNS2_HUMAN EKEENEGLAT IPACWWWATV SMTTVGYGDV VPGTTAGKLT ASACILAGIL
KCNS1_RAT E.EKNVGFDT IPACWWWGTV SMTTVGYGDV VPETVAGKLA ASGCILGGIL
KCNS1_MOUSE E.EENEGFHT IPACWWWGTV SMTTVGYGDV VPETVGGKLA ASGCILGGIL
KCNS1_HUMAN EKEEDVGFNT IPACWWWGTV SMTTVGYGDV VPVTVAGKLA ASGCILGGIL
401 450
KCNS3_RABIT VVALPITIIF NKFSKYYQKQ KDIDVDQCSE DPPEKCPELP YFNIRDLYAQ
KCNS3_RAT VVALPITIIF NKFSKYYQKQ KDMDVDQCSE DPPEKCHELP YFNIRDVYAQ
KCNS3_HUMAN VVALPITIIF NKFSKYYQKQ KDIDVDQCSE DAPEKCHELP YFNIRDIYAQ
Q8BQZ8_MOUSE VVALPITIIF NKFSKYYQKQ KDMEVDQCSE DPPEKCHELP YFNIRDVYAQ
Q5BLW6_BOVIN VVALPITIIF NKFSKYYQKQ KDIDVDQCSE DPPEKCQELP YFNIRDIYAQ
KCNS2_RAT VVVLPITLIF NKFSHFYRRQ KQLESAMRSC DFGDGMKEVP SVNLRDYYAH
KCNS2_MOUSE VVVLPITLIF NKFSHFYRRQ KQLESAMRSC DFGDGMKEVP SVNLRDYYAH
KCNS2_HUMAN VVVLPITLIF NKFSHFYRRQ KQLESAMRSC DFGDGMKEVP SVNLRDYYAH
KCNS1_RAT VVALPITIIF NKFSHFYRRQ KALEAAVRsr EFEDLLSSVD GVSDVSLETS
KCNS1_MOUSE VVALPITIIF NKFSHFYRRQ KGLEAAVRsr EFEDLLSSVD GVSDVSLETS
KCNS1_HUMAN VVALPITIIF NKFSHFYRRQ KALEAAVrsq EFEDLLSSID GVSEASLETS
451 477
KCNS3_RABIT RV...HAFIT SLS.SVGIVV SDPDSTD
KCNS3_RAT QV...HAFIT SLS.SIGIVV SDPDSTD
KCNS3_HUMAN RM...HAFIT SLS.SVGIVV SDPDSTD
Q8BQZ8_MOUSE QV...HAFIT SLS.SIGIVV SDPDSTD
Q5BLW6_BOVIN RM...HAFIT SLS.SVGIMV SDPDSTD
KCNS2_RAT KVKSLMASLT NMSRSSPSEL SLDDSLH
KCNS2_MOUSE KVKSLMASLT NMSRSSPSEL SLDDSLH
KCNS2_HUMAN KVKSLMASLT NMSRSSPSEL SLNDSLR
KCNS1_RAT RETSQEGRST DLETQAPSEP AKSHSY.
KCNS1_MOUSE RDTSQEGRST DLETQAPREP AKSHSY.
KCNS1_HUMAN RETSQEGQSA DLESQAPSEP PHPQMY.
